| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4148 |
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| Symbol | |
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| ID | 8335502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4687769 |
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| End bp | 4690135 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957251 |
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| Product | Ig family protein |
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| Protein accession | YP_003114853 |
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| Protein GI | 256393289 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4934] Predicted protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0784592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.172989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAATCA GCTCACGCCT GCGCGCGTTC GCGGGCCTGG CAACAGCCGT CGCCATGGGC
GGCGCGCTCG CGATCGGCAC CGCGTCGGGG GCCACCGCCT CCGCCGTGCC CTCCTCCTCG
GCTGTCACCT CGGCGACCGC CGCGCTGATC GCCGCTGAGG CCGCGGGCTC CGCGCACGCC
TCACAGCCGG CCCTCACCGC TGCGAACTCG GGCGCGACCA ACGCGTGCCC GTCGGTCATC
GTCGTCGGAC ACCAATCCTG CTTCGCCCTG AAGCGGAACG CGGTGCAGCC CTCGGCCGTC
TCGCCGAACT CCATTCCGTC CGGTGTCGGC TATGGGCCCT CGCAGCTGCA GTCGGCCTAC
AACCTGACCT CGGCCGCGGC CTCCAACGGC GCCGGGCGCA CCATCGCCCT GGTCGACGCC
TACGACTACC CCACCGCCGC AGCCGACCTG GCCGCCTACC GCTCCGCCGC CGGACTGCCC
GCCGGAAACT TCACCAAGAT CAACCAGAAC GGCCAAACCT CCCCGCTGCC CTCAGCACCG
CCCTCAGGCG ACGACTGGAC CGTCGAGGCC GCCCTGGACA TGGACATGGC CTCAGCCATC
TGCCCCCTGT GCAACATCGT CCTGGTCGAA GCCCAAGACG ACTCCAGCGA CGGCCTGTAC
ATCGCACAAG CAGCCGCCGC AGCCCGCGCC ACCTACATAT CCAACTCCTG GGGCGGCTCG
GAATCCTCCA CCGACCCCTC CAGCGACAAC ACCTACTTCA AACACGCCAC CGGCACCGTC
ACCACCGTCT CCGCCGGCGA CTCCGACTAC GGCGTTTCCT ACCCGGCGAC CTCCCCCAAC
GTCGTCGCCG TCGGCGGCAC CGCACTATCC ACCGCCTCCA ACACCCGCGG CTGGACCGAA
TCAGTCTGGA ACACCTCCAC CGGCTCAGAA GGCACCGGCT CGGGCTGCTC AGCCTATGAA
GCCCAGCCCT CCTGGCAGAC CGCGCTGAAC ATGCCCGCCG GCTGCTCCAA GCGCATCGAC
AACGACGTCG CCGCAGACGC CGACCCCGCC ACCGGCGTCG CCGTCTACGA CACCTACAAC
GGCGACGGCG GCTGGAACGA AGTCGGCGGC ACCTCAGCCT CCTCCCCCAT GGTCGCCGCC
ATGTACGCCC TCGCCGGCAA CGCCGGCGCC AACCCGGCCC AAGACATCTA CCAGCACACC
AGCAACTTCT ACGATGTCAC CACCGGCAAA GACGCCTCCT CCTGCAGCCC GGCGTACCTG
TGCACCGCCG AAACCGGCTA CGACGGCCCC ACCGGCATCG GCACCCCCAA CGGCATCGCA
GGCCTGCAAA CCGGCGGCAC CAGCTCCGAG ACCGTCTCGG TGAGCAACCC CGGCAACCAG
ACCTCGACGC AGGGCACCGC GATCAGCACC CTACAAATCT CGGCCACTGA CTCCGCGAGC
AAGGCACTGA CCTACTCGGC CACCGGGCTT CCGGCCGGCC TGTCGATCAG CTCCAGCGGC
GCCATCACCG GCACGCCGAC CGGCACCGGC AGCTCGTCGG TGACCGTCAC GGCGTCTTCG
GGGACCGCTT CGGGCAGCAC GTCATTCACG TGGACGGTGA ACCCGCAGGG CGGGACCGAG
ACGGTCTCGG TGAGCAACCC GGGCAACCAG ACCTCGACTC AGGGCACTGC CATCAGCACC
CTGCAGATCT CCGCATCTGA CTCGGCGGGC AAGTCGCTGA CCTACTCGGC GACCGGGCTT
CCGGCCGGCC TGTCGATCAG CTCCTCCGGC GCCATCACCG GCACGCCGAC CGGCACCGGC
ACCTCGTCGG TCACCGTAAC CGCGTCCTCG GGCACCGCGT CGGGCTCGAC CACCTTCTCC
TGGACGGTCA ACCCGACCGG CGGCGGCGGA TGCACCGCGA CGCAGCTCCT GGGCAACCCC
GGCTTCGAAA CCGGTAGCGC CTCCCCGTGG ACCGCCAGCG CCGGCGTCAT CGACAGCAGC
TCCTCCGAGC CGGCCCACAC CGGTTCCTGG AAGGCCTGGC TCGACGGCTA CGGCACCACC
CACACCGACA CCCTGTCCCA GAAGGTCAGC ATCCCCGCCA CCTGCAAGAC GGCGAACTTC
ACCTTCTGGC TCCACATCGA CACCTCGGAG ACCACCACCA GCACCGCCTA CGACAAGCTG
TCGGTCCAGG TCCTCAACGC CTCCGGCTCG GTCCTGGGCA CCCTGGCCAC CTACACCAAC
CTCAACCACA ACACCGGCTA CGCGCAGCGC TCCTTCAACC TGGCCAGCTA CATCGGCCAG
ACCATCACCC TGAAGTTCAC CGGCAGCGAG GACCTGTCCT TGCAAACCTC GTTCGTCATC
GACGACACTG CCCTGAACAT CAACTAG
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| Protein sequence | MRISSRLRAF AGLATAVAMG GALAIGTASG ATASAVPSSS AVTSATAALI AAEAAGSAHA
SQPALTAANS GATNACPSVI VVGHQSCFAL KRNAVQPSAV SPNSIPSGVG YGPSQLQSAY
NLTSAAASNG AGRTIALVDA YDYPTAAADL AAYRSAAGLP AGNFTKINQN GQTSPLPSAP
PSGDDWTVEA ALDMDMASAI CPLCNIVLVE AQDDSSDGLY IAQAAAAARA TYISNSWGGS
ESSTDPSSDN TYFKHATGTV TTVSAGDSDY GVSYPATSPN VVAVGGTALS TASNTRGWTE
SVWNTSTGSE GTGSGCSAYE AQPSWQTALN MPAGCSKRID NDVAADADPA TGVAVYDTYN
GDGGWNEVGG TSASSPMVAA MYALAGNAGA NPAQDIYQHT SNFYDVTTGK DASSCSPAYL
CTAETGYDGP TGIGTPNGIA GLQTGGTSSE TVSVSNPGNQ TSTQGTAIST LQISATDSAS
KALTYSATGL PAGLSISSSG AITGTPTGTG SSSVTVTASS GTASGSTSFT WTVNPQGGTE
TVSVSNPGNQ TSTQGTAIST LQISASDSAG KSLTYSATGL PAGLSISSSG AITGTPTGTG
TSSVTVTASS GTASGSTTFS WTVNPTGGGG CTATQLLGNP GFETGSASPW TASAGVIDSS
SSEPAHTGSW KAWLDGYGTT HTDTLSQKVS IPATCKTANF TFWLHIDTSE TTTSTAYDKL
SVQVLNASGS VLGTLATYTN LNHNTGYAQR SFNLASYIGQ TITLKFTGSE DLSLQTSFVI
DDTALNIN
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