| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4142 |
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| Symbol | |
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| ID | 8335496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4682230 |
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| End bp | 4683186 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957245 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003114847 |
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| Protein GI | 256393283 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00637596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.887483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGG CCCGCCTGCG CCGCATCGCC GTCCTCGTCC TGGAAGGTGC CAAGCCGCTG
GATGTCGGCA TTCCCGCGCA GGTGTTCACC ACGCGCGCGA GCATGCCGTA CGAGGTCCGG
GTGTGCGGTG CCGCGCCCGG GCTGGTGACC GGCGGCGACG GGTTGGCGTA CCACGTCGCG
CATGGTCTGG AGGCGCTGGC GTGGGCGGAC ATCGCCTTCA TCCCCGGCTA CCGCGCTCCC
GACCGCGACG ATCCGCCGCC GGCCGTCGTG GCGGCACTGA TCGCCGCGCA CGAAGGGGGC
ACGCGGCTCG CCGCGATCTC CACCGGGGCG TTCGCTCTGG CCGCGACCGG GCTGCTCGAC
GGCAAGCGCG CCACGACCCA CTGGCACTAC ACGCGCACAC TCGCGCAGAA GCATCCGCAG
ATCCGCGTCG ATGAGAACGT CCTGTTCGTC GACGAAGGCA GTGTCCTGAC ATCGGCCGGC
GCCGCGTCGG GCATCGACCT GTGTCTGCAC ATCCTGCGCG GCGACCTCGG GGTGTCGGCG
GCGAACCACG CGGCGCGCCG GCTCGTCGCC GCGCCGTATC GCAGCGGCGG GCAGGCGCAG
TACGTGCCGC GCAGCGTGCC CGAACCGCTC GGCGAACGCT TCGCAGCCAC GCGCGAATGG
GCTCTGCGTC GACTCGGCGA TCCGCTGAGT CTGGAATCCC TCGCCGAACA CGCGGCGGTC
TCCCCGCGTA CGTTCTCCCG GCGTTTCATG GAGGACACCG GCTACACGCC GATGCAGTGG
GTCACGCGTG CCCGCGTCGA CCTGGCCCGC GAGCTGCTGG AGCGGTCGCA GCGCAGTATC
GAGCAGATCG CGAACGACGT CGGGCTCGGG ACCGGCACGA ACCTGCGGGC GCATTTCCAG
CGGATCCTCG GCACGACGCC GAGCGAGTAC CGGCGGACCT TCACGCGCGG CGAGTAA
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| Protein sequence | MPTARLRRIA VLVLEGAKPL DVGIPAQVFT TRASMPYEVR VCGAAPGLVT GGDGLAYHVA
HGLEALAWAD IAFIPGYRAP DRDDPPPAVV AALIAAHEGG TRLAAISTGA FALAATGLLD
GKRATTHWHY TRTLAQKHPQ IRVDENVLFV DEGSVLTSAG AASGIDLCLH ILRGDLGVSA
ANHAARRLVA APYRSGGQAQ YVPRSVPEPL GERFAATREW ALRRLGDPLS LESLAEHAAV
SPRTFSRRFM EDTGYTPMQW VTRARVDLAR ELLERSQRSI EQIANDVGLG TGTNLRAHFQ
RILGTTPSEY RRTFTRGE
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