Gene Caci_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4141 
Symbol 
ID8335495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp4681116 
End bp4682114 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID644957244 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003114846 
Protein GI256393282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0553967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA TCGCCATCAA CGGCTTCGGG CGCATCGGCC GCAATGTGCT GCGTGCCCTC 
CTGGAGCGGG GCAGCGACCT GGAGGTCGCG GCAGTCAACG ACCTGACCGA GCCCGCCGCC 
CTGGCACGCC TGCTCGCCTT CGACACCACC GCCGGCCGGC TCGGACGCCC GGTGAGGGCC 
GACGGCGACA CGCTGGTCGT TGACGGCCGG CGCATCGCGG TGCTCGCCGA GCGGGACCCG 
GGGCAGCTGC CGTGGGCCGA GCTCGGCGTC GACATCGTGC TGGAGTCGAC CGGCCGCTTC 
ACCGCCGCCA AGGCCGCGCA CGCGCACTTG GACGCCGGCG CGAGGAAGGT GCTGGTCAGC 
GCGCCGTCCG ACGGCGCCGA CGTGACCTTG GCCTACGGCG TCAACACCGA GGCCTACGAC 
CCGGTCGCGC ACACGATCGT GTCCAACGCC TCGTGCACGA CCAACGCGCT GGCGCCGCTG 
GCCGCCGTCC TGGACGACCT GGCCGGCATC GAGCACGCCT TCATGACCAC GGTCCACGCC 
TACACCCAGG AGCAGAACCT GCAGGACGGT CCGCACCGCG ACCCCCGCCG GGCGCGCGCC 
GCCGCCGTCA ACATCGTGCC GACGACCACC GGCGCGGCCA AGGCCATCGG CCTGGTGCTG 
CCCCGCCTGG ACGGCAAGCT CTCGGGCGAC TCGATCCGGG TCCCGGTGCC GGTCGGCTCG 
ATCGTCGAGC TCAACACCAC CGTCTCCCGC GACGTGACGC GCGAGGACGT GCTCGCCGCC 
TACCGCACGG CGGCGAAGGG CGCGCTGGCC GGCATCCTGG AGTACTCCCA GGACCCGCTG 
GTCTCCTCCG ACATCGTCGG CAACCCCGCA TCAGCGATCT TCGACTCCGC GCTGACCCGG 
GTCGAGGGGC GCCACGTGAA GGTGGTCGCC TGGTACGACA ACGAGTACGG CTTCTCCAAC 
CGCGTGGTCG ACACGCTGGA GCTGCTCGCC ACAAGCTGA
 
Protein sequence
MTRIAINGFG RIGRNVLRAL LERGSDLEVA AVNDLTEPAA LARLLAFDTT AGRLGRPVRA 
DGDTLVVDGR RIAVLAERDP GQLPWAELGV DIVLESTGRF TAAKAAHAHL DAGARKVLVS 
APSDGADVTL AYGVNTEAYD PVAHTIVSNA SCTTNALAPL AAVLDDLAGI EHAFMTTVHA 
YTQEQNLQDG PHRDPRRARA AAVNIVPTTT GAAKAIGLVL PRLDGKLSGD SIRVPVPVGS 
IVELNTTVSR DVTREDVLAA YRTAAKGALA GILEYSQDPL VSSDIVGNPA SAIFDSALTR 
VEGRHVKVVA WYDNEYGFSN RVVDTLELLA TS