| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4118 |
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| Symbol | |
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| ID | 8335472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4656530 |
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| End bp | 4659073 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957221 |
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| Product | ANTAR domain protein with unknown sensor |
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| Protein accession | YP_003114823 |
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| Protein GI | 256393259 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGTG CGGGGGCTGG TGGATCGGCT GATGTTCATG CTGCTGGCTT TTTCGGCGCT
GATGCAATCG AGACCAGTGC GCAGGCCGAT GCGGCGCTGG CTGCGGCAGC GGCTGCTGGT
GGCGGCCAAC GATCAACCAC CTCATCCGCT CCTACCTCCG CCGCTGCCGG TGCCCGCGTC
CCCGCCGCCG GCATCGGTCG CCTGGCCGCG ACCGTCAGTC GCCTGCAGAA TCTGCTCAAT
GATGCCGAGG CTGACGCCGA TGTTCGGGTG CTGATCGCCC TGGCGCGCGG CATTCTGATG
GAGCGGCTGC GGGTTGCGCC TGCGGCTGCC GCTCGTCAGC TTGAGGAGCT TGCTGAGCGT
AGTGGGTTGC CGGTGCTTGA GCTTGCTGCC GATATCGTCA ACGAGATTGC CGGCGATCCG
GTCGGGCACG TTTCCCACGT CGGGAATGCC GACCGCAGCT CTTACGGCTC CGGTGCGCTT
TCCCTGAACG TGCGTCTGCG CGCGGCCGAG GCCGGTGTGC TCACCGCCTC TGATGTGCAC
GCCGCCGCCG GGTCGTTGCA TCGGCAGGCG CTGGCGCCGT TGGGTGCCGT GGCGCTCGCG
ATCTGGGCGT TGGCTGCCGA TGGGTCGCTG CTGCTCGCCG GGTACTCCGG CTTCCCTGCC
AACGAGGCGC GTAGTTGGCA TCACACGCCG CCCGGCGTCG AGACCGCCGC TCAGCGTGCG
ATTCAGACGC GTGCCATCCA CTGGAGCACC GGGCCCGTCA CCCTGCGCGC GCCCAGCATC
GGGGAGCGCA CTCTGGGCGA GGAGGCCACG CGCGTCGCGA TTCCGGCGCA GCTCGGCGGA
CGGTTGCTCG GCGTGCTCGA GGTCTGCTGG CCCGGGCCGG TCGGTGAGCT GCCGCAGTCC
GTGCACCGCC AGCTCGACGC GCTCGCCGAG TTGTGCGCGC ACACTCTGGA CGTGATCCCC
GCCGCCGACT CGGGAGCTGG AACCTCCAGC GCGTCAAGCG CCGGCGCCAC AGCCAGCACT
GGCTCCGGCT CCATCGACCC CGGCCTGAAA GACCTCCTCG CAGGTCTCCT CGAGCCGGCG
CTCATCCTCC AGCCGCAGCA CGACGAGGCG GGCCGCCTCA CCGACTTCCT CATCGTCCAC
GCCAACGAGC GCTTCATCGA CCCCGTCGGA CGCCCGCCCG CGGCGATCCT CGGCCTGCCG
TTCCTGCACG CCTACCCGAT GGCGGCCGAG GACGGCGGGC TGTTCGAGCG CGTCGAGCAC
GTCCACGCCA CCGGCGAGCC CTTCCACCAC GACCGCATCG TCCTGCGTTC CCTGATCGCC
GGCATCACGG TCTCCACCTC CCTCACCGTC GGCATCAGCC GCCTGGGCAA CTGCCTGGTC
CTCACCTGGC ATCCCGAGGA CGAGGAAGCC CGCCTGGCGC GCCTGCTCCA GCACGCCCAG
CGCCTGGGCC GCATGGGCGG CTTCGAAGAG AACCTGCTCA CCGGCGAGGT CATCTGGAGC
ACCGAACTGC TCGAGCTGTT CGCGCTGCCC GGGACCGCCC AGCCCGTCCC GATCCGCGAC
CTCGCCGCGC ACGCGCACGC CGACGACGTC GCCGCGATCT CCCGCTTCAT CCGCACGATC
CTGCACCACC GCAGCCCCGC CTCCACCGCC TTCCGCCTCC TGCGCAGCGA CGGAGTCCAG
CGCTACATCC GGATCGTCGC CGAACCGGTC CTGGAAGACG GCACGATGAC CGCCATCCGC
GGCGCCTGCC AAGACGTCTC CGCCCAGCAC TGGACGGAGA TCGCCCTGGC CGCCACCCGC
GACCGCCTGG AGCACACCGA GCGCGAGGTC GAGGAAGGCA ACCGCCTGAC CCTGCGCCTC
CAGCGCGCGA TCATGCCCGT CGCGCCGACG ATGATCGATG CCTGGGGACT GCAGATAGCG
ACCAGATACC GCCCCGCCGA GAAGGGCCAC CTGGTCGGCG GCGACTGGTA CGACGCCGTC
GTCCTGCCGA ACAAGCGCAT CCTGCTCGTC GTCGGCGACG TCGCCGGGCA CGGCATCGAC
GCCGCCACCG AGATGGTCGC CCTGCGCAAC GCCCTGCGCG GCCTCGCGGC GACCGGCGCC
ACGTCCGCGC AGATGCTCAA CTGGCTCGGC ACTGTCGCTC ACCACATGTC CGGAAACGTA
GTCACCGCAA CGGTTGTCTG CGGTATCTAC GACCCCGAAG ACCGCACCCT GCGCTGGTCC
CGAGCCGGTC ACCCGCCACC CCTGCTGGTC CGCGACGGCA CCACGATCGT CCCTCCGATG
CCCGAGGGCG TGCTCCTCGG CGCCTTGGGC GACGCCCGCT ATGGCGAGCA GACCCTGCAA
CTCCAGCCCG GCGACACGCT GCTGCTGTTC ACCGACGGAC TGATCGAGCG CCGCGACCGC
GACATCGAGG AATCGCTGCA CGACCTGCTC GCCCTGGTCG ATCCGAGTAT CGACGCCCTG
GAGGAGCAAC TGGAGCACCT GCTCCTGCAC AGCAACGCCG ACACCGACGA CGACACTTGT
CTGATCGGGG TGAAGGTGTG CTGA
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| Protein sequence | MVGAGAGGSA DVHAAGFFGA DAIETSAQAD AALAAAAAAG GGQRSTTSSA PTSAAAGARV
PAAGIGRLAA TVSRLQNLLN DAEADADVRV LIALARGILM ERLRVAPAAA ARQLEELAER
SGLPVLELAA DIVNEIAGDP VGHVSHVGNA DRSSYGSGAL SLNVRLRAAE AGVLTASDVH
AAAGSLHRQA LAPLGAVALA IWALAADGSL LLAGYSGFPA NEARSWHHTP PGVETAAQRA
IQTRAIHWST GPVTLRAPSI GERTLGEEAT RVAIPAQLGG RLLGVLEVCW PGPVGELPQS
VHRQLDALAE LCAHTLDVIP AADSGAGTSS ASSAGATAST GSGSIDPGLK DLLAGLLEPA
LILQPQHDEA GRLTDFLIVH ANERFIDPVG RPPAAILGLP FLHAYPMAAE DGGLFERVEH
VHATGEPFHH DRIVLRSLIA GITVSTSLTV GISRLGNCLV LTWHPEDEEA RLARLLQHAQ
RLGRMGGFEE NLLTGEVIWS TELLELFALP GTAQPVPIRD LAAHAHADDV AAISRFIRTI
LHHRSPASTA FRLLRSDGVQ RYIRIVAEPV LEDGTMTAIR GACQDVSAQH WTEIALAATR
DRLEHTEREV EEGNRLTLRL QRAIMPVAPT MIDAWGLQIA TRYRPAEKGH LVGGDWYDAV
VLPNKRILLV VGDVAGHGID AATEMVALRN ALRGLAATGA TSAQMLNWLG TVAHHMSGNV
VTATVVCGIY DPEDRTLRWS RAGHPPPLLV RDGTTIVPPM PEGVLLGALG DARYGEQTLQ
LQPGDTLLLF TDGLIERRDR DIEESLHDLL ALVDPSIDAL EEQLEHLLLH SNADTDDDTC
LIGVKVC
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