| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4110 |
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| Symbol | |
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| ID | 8335464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4642884 |
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| End bp | 4643561 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957213 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003114815 |
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| Protein GI | 256393251 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.704766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCGG AGACGCCGCA GAAAAACAGA CTCCTGATCG TCGAGGACGA CACCGAGCTC
GCCACGCTGC TCACGGCCCT GATCGAGGGC GAGGGCTTCC ACGTGGACAC CGCGCACGAC
GCGCAGCGCG GGCTGCATCT GGGGCTGGCG CACGATTACC GGGTCATGGT GATCGACCGG
CGGCTGCCCG GGATGGACGG TCTGGACCTG GTGGCCGGGC TGCGGCGCCG TGCGGTCACC
GCCCGGGTGC TGATCCTCAC GGCGCTGGGC GCGCACGCCG AGCGCGTGCG CGGGCTCGAC
GGCGGCGCCG ACGACTACCT GACCAAGCCG TTCGACGTGC ATGAGCTGCT GGCGCGGGTT
CGCGCGCTGG ACCGGAGGTT CTCCGACGCC TCGGATCTGC TCCGGCTCGG CGAGGGGTAC
CTGGACCGGC AGGCGCGGGA CGTCGCGCTG GCGGACGGGA CGCGCGTCGC GCTGTCGGGG
CGCGAGTTCG ACCTGTTGGA CACCTTGGCC GCACGACCGC GCGCCATCCA TTCGCGATCG
CAGTTGCGGG CCACGGTGTT CCCGGACACG GCGGCGGAAT CCGTTGTCGA CACCTATGTG
TACTACTTAC GCCGTAAGCT CGGCCGGCAG ATTGTGCGGA CCGTTTACGG CCTCGGCTAT
CGGATAGGCA TGCTGTGA
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| Protein sequence | MAAETPQKNR LLIVEDDTEL ATLLTALIEG EGFHVDTAHD AQRGLHLGLA HDYRVMVIDR
RLPGMDGLDL VAGLRRRAVT ARVLILTALG AHAERVRGLD GGADDYLTKP FDVHELLARV
RALDRRFSDA SDLLRLGEGY LDRQARDVAL ADGTRVALSG REFDLLDTLA ARPRAIHSRS
QLRATVFPDT AAESVVDTYV YYLRRKLGRQ IVRTVYGLGY RIGML
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