Gene Caci_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4087 
Symbol 
ID8335440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4615961 
End bp4616950 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content73% 
IMG OID644957190 
Productputative RNA methylase 
Protein accessionYP_003114793 
Protein GI256393229 
COG category[L] Replication, recombination and repair 
COG ID[COG1041] Predicted DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0349253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGACA GCACCACCAC CGCCCCGACC GGCCGCACCC CGGCCCGCAG CCTGTCGGGG 
ATACCCACCT CGATCTGGGT CACCGCGCAG CGCAACTCCC GCGCCCAGCG CACCGGCCGC
TACACCCCGG ACTCGGTCGC GCACCCGGCC AAGATGCTCC CGGACATCGC CGCCTACGCC
ATCTCCACCT ACACCCAGCC TGACGATCTG GTCGTCGACC CGATGTGCGG AATCGGCACC
ACCCTGGTCG AGGCGCTGCA CCTCGGACGG CGCGCCCTGG GCGTGGAGTA CGAGGCCCGC
TGGGCCAAGT ACGCCGAGGC CAACATCGCC CTGGCCCGCG CCCAGGGAGC CGTCGGCACC
GATGCGAAAG TGATCCGCGC GGATGCCCGC AAGCTGGCGA AGGTCGCGCC GCCGGAACTG
CTCGGAACCG CCGCCCTGGT CATCACCTCC CCGCCCTACG GCGCGGCGGT CCACGGCCAG
ATCAAGGCCA CCGCCGAGAC CGGCGAGAAG GGCGTGCAGA AGTTCGACTA CCGCTACTCC
ACCGACCGCG GGAACCTCGC CCACGTCGGC CGCGAGGAAC TGGTCGCCGG CTTCGCCCAG
ATCCTGTCCG GCTGCCGGGA ACTGCTGCGC CCCGGCGGCG TGGTCGCGGT GACCGCCCGG
CCCTGGCGGG AGCACGGGGA ACTGGTCGAT CTGCCCTCGG AGGTCATCGC CGCCGGGGTG
GCGGCGGGCC TGCAGCCGAT CGAGCGGTGC CTGGCCCTGA TCGCCGGAGT CCGCGACCGG
CAGCTGGTCA CCCGGCCGAG CTTCTTCCAG CTCGCGAACA TCCGCCAGGC CCGCGCCGCC
GGCGTCCCGA TGCACCTGAT CGTGGCGGAG GATGTCCTGC TGTTCCAGGC GCCGGGACCG
GCTCTCGACG GCCCTGAAAC CGAGCCTGGC CGCGCCTGGA AGCAGGCCGA CGGCGACGGC
GGTTCGGGCG AGATTCCGGA GATCGTGTGA
 
Protein sequence
MTDSTTTAPT GRTPARSLSG IPTSIWVTAQ RNSRAQRTGR YTPDSVAHPA KMLPDIAAYA 
ISTYTQPDDL VVDPMCGIGT TLVEALHLGR RALGVEYEAR WAKYAEANIA LARAQGAVGT
DAKVIRADAR KLAKVAPPEL LGTAALVITS PPYGAAVHGQ IKATAETGEK GVQKFDYRYS
TDRGNLAHVG REELVAGFAQ ILSGCRELLR PGGVVAVTAR PWREHGELVD LPSEVIAAGV
AAGLQPIERC LALIAGVRDR QLVTRPSFFQ LANIRQARAA GVPMHLIVAE DVLLFQAPGP
ALDGPETEPG RAWKQADGDG GSGEIPEIV