Gene Caci_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4081 
Symbol 
ID8335434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4609740 
End bp4610705 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content75% 
IMG OID644957184 
Producthypothetical protein 
Protein accessionYP_003114787 
Protein GI256393223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0476664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0519448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGG AAGAACAGGC ACGCTACGCC ACCCGTATCC CGGCCGACGT GGACCGCCCG 
GACGTGATCG TGGCCAGGCT CACCGCTCGC CAGGTGGTGG TCCTGGCCGC CACGGGGCTT
CTGGTGTGGG CCGGATTCAT GACCGCGCAC GCCGCCCTGC CGAAGGTCCC CTCGGCCTAC
CTGATCGCTC CGGCTGCGCC GATCGCCGCG ATCGCGATCG GGCTGGCCTT GGGCAAGCGC
GACGGGCTGA CGGCCGACCG CTTCGTCTTG GCTGCGCTGC GCCACGGCCG GGCGAAGAAG
CACCTGGTGC CCAGCGGCGA GGAGCAGACT CCGGCGCTGC CGGAGTTCCT GCCCAAGGCG
GTCCGCGCGA AGGCCGGACC GGCGCCCGCA GCGATGACGA TGCCCGCACG CGGGATCGAC
GAGACCGGCG TGTTCGACCT CGGTGCCGAG GGCTTCTCGG CGCTGGCCGC CTGCGGCACG
GTCAACTTCG CGCTGCGCAC CGCCGGCGAG CAGGACGCCC TCGTGGCCGC GTTCGGCCGC
TGGCTCAACG GCCTCACAGC GCCGGTCCAG CTGCTGGTGC GCACGCACCG CCTGGACCTG
TCCGGCGCGG TGGACCAGCT GCGCGCCGCA GCTCCCAGCC TGCCGCACCC GGCGCTCGAG
CAGGCTGCCG CCGAGCACGC CGACTACCTC GAGGCCCTGG CCGGCCGCCG CGATGTCCTG
CACCGCCAGG TGCTGCTGGC CGCGCGCGAG CCGCGCACCG GACGCGGCCG GAAGACAAGC
GCTGCCAGCC CCGACGCCTC GGCGCCGATG CGGCTGCACC GCCGCGTGGA CGAGGCCGCC
CGCGCCCTGT CCGGCGCGCA GATCCCGGTG CGCGCCTTCG AATCCGAGCG CCTGCGCCAC
CTGCTGACCG ACGCCACCGG CGCGGGCCAG GAGGCCGAAC CCCTGGAAGG AGAGACCGAG
CGATGA
 
Protein sequence
MREEEQARYA TRIPADVDRP DVIVARLTAR QVVVLAATGL LVWAGFMTAH AALPKVPSAY 
LIAPAAPIAA IAIGLALGKR DGLTADRFVL AALRHGRAKK HLVPSGEEQT PALPEFLPKA
VRAKAGPAPA AMTMPARGID ETGVFDLGAE GFSALAACGT VNFALRTAGE QDALVAAFGR
WLNGLTAPVQ LLVRTHRLDL SGAVDQLRAA APSLPHPALE QAAAEHADYL EALAGRRDVL
HRQVLLAARE PRTGRGRKTS AASPDASAPM RLHRRVDEAA RALSGAQIPV RAFESERLRH
LLTDATGAGQ EAEPLEGETE R