Gene Caci_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4046 
Symbol 
ID8335399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4574747 
End bp4576621 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content66% 
IMG OID644957151 
Producthypothetical protein 
Protein accessionYP_003114754 
Protein GI256393190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00161846 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0746205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTGA AGCGCGTGAT CACCCATGGA CATGTGAATC AGGAGTGGGC CGACATCGCG 
TTCGTGCTCC CGGCGGGCGG CGAACTCCAC CCCCACGACC GGATCGCGGT GTTGCAACAC
TACGGCCGCG TCGTCATAGC CACCGTCCCG GAAGACGACG CCGACGAGGT GCGCGCCATC
GCGCACGGCA GCCTGGTCGC CGCCGGCCGG CGGCACGGCG ACGTGGACGC GGCGACCTGG
CACTCGCTGG ATCCTGCTGA GCGCCTCGCC CTCGAGGGCT ACTGGCTCAA CCACTCTGAG
GAATACCGGC GGACCAAGGA CGAACGGCCC GGAATGGGGG CCGCCTGGGA TCATCCGGAC
TTCCTGCCAC CCGACCCGCC GGGAGGGGTG GACCTCACCG CCGTGGCCGA GATGAACCAC
CGGCTGCGCG GATCGGTCGC CATCGGGCTG GTGATGGTCA GCGGGCCCGA CGATCTGGCC
TTCAGCGACG ACCAGAAGGC CCGCGTGCTG GCGGAGACCC AGACCGGCCT GTCCTGGTTG
GGCTGGATGT GGCAGCTGAA GCGGGTGCGG TACATCGTGG ACGTCTACAC CCCCACCATC
ACGACACCCG CCGACCCGTC GGCCCCGGAC AGGGAGAAGG AGGCGGTGTG GCGCAATCCG
GCGATGAAGG AGATGAAGCA GAAGGAGGGG AAGGAAGGCG TCGGTGAGTT CGCGGAGTCG
TTGCGGAAGA AGCACAGCAC GGACGGCGCG TACGTAGCCT TCTTCATGCA CTACCCCGCC
CTGAATTTCG CCTACGCGGA GCCGGGCTGG CCGGAGACGG TCATGCAGTA CTCGAACGGC
CCCTGGACGC CGTACGGGAT CGACCGGGTC TTCGCGCACG AGACGTGCCA CATCTTCGGC
GCGCCGGACG AGTACCGCGA GTCCCTGTGC CGGTGCGGGG GGAGTCACGG CTACTACCAC
ATGCCCAACG ACAACTGCGA CAACTGCGAC GGCCCCCACG AGTTCTGCAT CATGGGCCGC
AACTGGTACG ACATGTGCAC CTGGACTCCG CGTCATCTCG GCGCACCCAT CTGGTGGGTC
AACGGACAGG ACAAGATCTT CTCCCCGGTG GCGGTCTCCG AGGGCGTCAT CTACTACCAG
GGCACGGACA GCTACATCTA CCGGGTCAAG ACCGACGGCA AGCCGGCCGT CAGGTTCGAC
AAGGAACAGA CGTCGGCGAC GCCGTGCGTC GTCGGCAAAG TCATTTACTA TCAGGGCACG
AACTACCGCC TGTACCAGGT GACGACCGAC GGCACGAGCG GCGGCAGCAT CGGCGAGATC
AAGCTGATGG GATCGCCGGT TTACAGCGAC GGCTACCTCT ACTACCGGGG TACGGACAAC
TATCTGTACA AGCTGCGCAT CGGCGATACC GAAGGCGAGC GCATCGCCAA CAACAAACTG
CTGTCACCGC CGGCCGTCGG CGGAGGATAC ATCTTCTATC AGGGTACGAA CTACTACCTG
TACAAGGTGC GCATCGGCGA GACGACCGGC ACGCGCGTCG GTGACGGCGA GTTGCTGTCG
TCGCCGTTCG TGAGCGACGG CGCTGTCTAC TTCCAGGGCA CGAACAACGG CCTCTACCGG
ATCCCCTTCG ACGGCAAGGT CTCCCAGCAG CTCGGCGAGT GCCGTACCCT GGCGACTCCG
TTCGTGGCCG GCGGCTGGGT GTATCACCAG GGCACGGACT GCCTGCCGTG GCGGGTCAAG
ACCGACGGCA CGGGCCGGGA GATACTGACC GGCGCACCCA TCCGGTCCAG CCCGGTCGTC
GCCGACGACG TCGTCTACTT CGAGGGCAAC GACCTGCTGC ACGAGAACCA CCTGTATATG
ATCAACCTCA CGTGA
 
Protein sequence
MIVKRVITHG HVNQEWADIA FVLPAGGELH PHDRIAVLQH YGRVVIATVP EDDADEVRAI 
AHGSLVAAGR RHGDVDAATW HSLDPAERLA LEGYWLNHSE EYRRTKDERP GMGAAWDHPD
FLPPDPPGGV DLTAVAEMNH RLRGSVAIGL VMVSGPDDLA FSDDQKARVL AETQTGLSWL
GWMWQLKRVR YIVDVYTPTI TTPADPSAPD REKEAVWRNP AMKEMKQKEG KEGVGEFAES
LRKKHSTDGA YVAFFMHYPA LNFAYAEPGW PETVMQYSNG PWTPYGIDRV FAHETCHIFG
APDEYRESLC RCGGSHGYYH MPNDNCDNCD GPHEFCIMGR NWYDMCTWTP RHLGAPIWWV
NGQDKIFSPV AVSEGVIYYQ GTDSYIYRVK TDGKPAVRFD KEQTSATPCV VGKVIYYQGT
NYRLYQVTTD GTSGGSIGEI KLMGSPVYSD GYLYYRGTDN YLYKLRIGDT EGERIANNKL
LSPPAVGGGY IFYQGTNYYL YKVRIGETTG TRVGDGELLS SPFVSDGAVY FQGTNNGLYR
IPFDGKVSQQ LGECRTLATP FVAGGWVYHQ GTDCLPWRVK TDGTGREILT GAPIRSSPVV
ADDVVYFEGN DLLHENHLYM INLT