Gene Caci_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4027 
Symbol 
ID8335380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4558892 
End bp4559521 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID644957133 
Producthypothetical protein 
Protein accessionYP_003114736 
Protein GI256393172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.148994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00308496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGTC ACCATTTTGG CTGCCGAGTG GCCGTCGGCT TCGCCGTCGG CGCGGCACTT 
CTGACTGCGG CTGGGTGTGC CAGCGGCGCT TCCAAGTCAT CGAGCGCTTC GTCTGGCACG
GCACCCAGCT CCGCGGGGAG TCAGCCCGCG ACTGCCAGCG CACCGGGCAG CACCGGATCG
TCCACGCCGA CCGCGTCGGC ATCGGTGGAC CAGTCCAGCC CGCAGGCGCA GGCTGCTATC
GCCACCTACA AGGCGCTGTG GGCAGACGTG GTAAAGGTCG AGGCCACCAT GAACGACCAG
GACCCGACGC TGGCAAACCA CCTGACCGGC GGCGCGCTGT CGTTCTTCCA GCAGGCGATC
CACATCAACA AGCTCGACGG CTACGTAGCT AAGGGCGAGC CGAAGTTGCT CCACCCGACG
GCTAAGCAGA TCATCGGCTC GGGCGCTGCA GCGAAGGTGC TCGTCGAGGA CTGCGTCGAC
GACTCCGGGT TCAACCTGTA CACAAGTGAC GGGACATTCG TCCACAACGG TCATCCAGGC
GGCCGGCGCT TGACCCAAGC CCTGGTGGAG CGGTCTGACG GGGTCCTGAA GGCGTCCGCG
TTCGCGTTCA GCGCGCCGGG CACATGCTGA
 
Protein sequence
MARHHFGCRV AVGFAVGAAL LTAAGCASGA SKSSSASSGT APSSAGSQPA TASAPGSTGS 
STPTASASVD QSSPQAQAAI ATYKALWADV VKVEATMNDQ DPTLANHLTG GALSFFQQAI
HINKLDGYVA KGEPKLLHPT AKQIIGSGAA AKVLVEDCVD DSGFNLYTSD GTFVHNGHPG
GRRLTQALVE RSDGVLKASA FAFSAPGTC