Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4019 |
Symbol | |
ID | 8335372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4551470 |
End bp | 4552138 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644957125 |
Product | hypothetical protein |
Protein accession | YP_003114728 |
Protein GI | 256393164 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.393141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000309132 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGTCGAGT TGCAGCAGGT CAAGACCGGG TTCGTGGCCA ACGACTTCTT CCTGATGGCC AATGATGACC CGTCTGGCCG GCCCCGTTTG TCGGAGCGGA TTCTCGCGGT CGGGTTGGCG GGTGCGCTGC TGTGCGAGCT GATCCTCACC AGAGGGGTAG ATATCGAAAA AGGCACCCTG GTGCTGACCG CCAACCGTCG TCCGCGGTCT CTATTGCTCG CTGGGTTGTG CAGTGAGGTG GAGGCGGAGG CGCCCCGTCC TGTGCGTGAC TGGCTGGACT ATCTGAGCTT GGAGTCGACC GAATTGGTGG GGCGACGGTT GCGGGCTTCG GGCGTCGCCC AGTTTCACGA GCCTCGGTTC AAGGTGCCGG GCAGGCCCGG CCGGTGGCTG CCGGTCGATG CGCAGGCGGC CAGCTGGCCG GCGGTTGATG TGACACGCAA GATCTACAAC GGTGCGGCGA CGGCGCCCGA TCTGGTGCTG TTCGGTCTGA CCCGCGCTAC CGGTCTGGAC AACCCGAACT TGTGGGAGAT CCGCCACCTG CTGACCGATC CGGGGCTGCT GGAGCAGACG CTTTCGCCGT TGGCGGTCTT CAATCCGGTG CTCGTGGAGC TGGTGGCCCA CACCGCGGCC GCGGTCGGCA GCGCTGTGGC GAGCCAGCGC AAAGGCTGA
|
Protein sequence | MVELQQVKTG FVANDFFLMA NDDPSGRPRL SERILAVGLA GALLCELILT RGVDIEKGTL VLTANRRPRS LLLAGLCSEV EAEAPRPVRD WLDYLSLEST ELVGRRLRAS GVAQFHEPRF KVPGRPGRWL PVDAQAASWP AVDVTRKIYN GAATAPDLVL FGLTRATGLD NPNLWEIRHL LTDPGLLEQT LSPLAVFNPV LVELVAHTAA AVGSAVASQR KG
|
| |