| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4019 |
|---|
| Symbol | |
|---|
| ID | 8335372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4551470 |
|---|
| End bp | 4552138 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644957125 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003114728 |
|---|
| Protein GI | 256393164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.393141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000309132 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGT TGCAGCAGGT CAAGACCGGG TTCGTGGCCA ACGACTTCTT CCTGATGGCC
AATGATGACC CGTCTGGCCG GCCCCGTTTG TCGGAGCGGA TTCTCGCGGT CGGGTTGGCG
GGTGCGCTGC TGTGCGAGCT GATCCTCACC AGAGGGGTAG ATATCGAAAA AGGCACCCTG
GTGCTGACCG CCAACCGTCG TCCGCGGTCT CTATTGCTCG CTGGGTTGTG CAGTGAGGTG
GAGGCGGAGG CGCCCCGTCC TGTGCGTGAC TGGCTGGACT ATCTGAGCTT GGAGTCGACC
GAATTGGTGG GGCGACGGTT GCGGGCTTCG GGCGTCGCCC AGTTTCACGA GCCTCGGTTC
AAGGTGCCGG GCAGGCCCGG CCGGTGGCTG CCGGTCGATG CGCAGGCGGC CAGCTGGCCG
GCGGTTGATG TGACACGCAA GATCTACAAC GGTGCGGCGA CGGCGCCCGA TCTGGTGCTG
TTCGGTCTGA CCCGCGCTAC CGGTCTGGAC AACCCGAACT TGTGGGAGAT CCGCCACCTG
CTGACCGATC CGGGGCTGCT GGAGCAGACG CTTTCGCCGT TGGCGGTCTT CAATCCGGTG
CTCGTGGAGC TGGTGGCCCA CACCGCGGCC GCGGTCGGCA GCGCTGTGGC GAGCCAGCGC
AAAGGCTGA
|
|---|
| Protein sequence | MVELQQVKTG FVANDFFLMA NDDPSGRPRL SERILAVGLA GALLCELILT RGVDIEKGTL
VLTANRRPRS LLLAGLCSEV EAEAPRPVRD WLDYLSLEST ELVGRRLRAS GVAQFHEPRF
KVPGRPGRWL PVDAQAASWP AVDVTRKIYN GAATAPDLVL FGLTRATGLD NPNLWEIRHL
LTDPGLLEQT LSPLAVFNPV LVELVAHTAA AVGSAVASQR KG
|
|---|
| |