Gene Caci_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4016 
Symbol 
ID8335369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4548045 
End bp4549127 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID644957122 
Producthypothetical protein 
Protein accessionYP_003114725 
Protein GI256393161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.905588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0158572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGT CCGTTCCAAC TCCCGCAGCG CCACCGCCGA TACGCGCCAC ATACGCCTAC 
CCCGCCATCC TCGCGGTGTA TGCAGCGGTA TTCGGTGCCG CAGCGTTCAC CTGGACCGCG
CTGCTGCTGT ACACCTATCA CGCCCTACCT GAGGCGTGGA TGGCGGCGAT TCTGCGCCAT
CAGAACGGTG CCGATGTCGT ACCTGCCGTG CTCGCCGGCT TGGCAGCGCT GATGATCTGC
GCCGCGCTGA TCACATCGGA ACGCGGCAAG CAGATAGTCG TGTTCAACAG TCCCGGGCGC
CGTGTCACGG CCTTGGGAAT CATCGCTGCG GCACTGATTC CGGTGGAATG GGCGCTGCGC
CATGTGCAAC TGCTGGAAAG CGACGACCTG ACCCCGCGGA TCGTGGAGTT GGTCGGCAGC
GCCGCACTGG CTGGAGCGTT GGCGGTGGTC CTGGCCGCTC CGGAACCGGC CGAGTTGGGC
ATCGGAGGCC GCAAGCACCG CAGCATCACC GAGTTTTACG CGTTAGCGCG CACCTCGCTG
CTGGGCCTGC TCGGCAGCTT GGCCGCGGTC AATCTGATCC TGTACGGGCT CAAGCCGCCA
GCGCTGGTCG GCCCTGTTGG CCCTGGCAGC GGGATGGTCG AATCCTTTTG GTTCTGGATC
GCTGTGGCGT GCGTGAACGC CGTCGTCGAG GAAGGCATCT GCACCGCCTG GCTGTATGCG
CTGCTCCACC GCGCCGGCCG GCCGAGGTAC GAGATCTACG CTGTCGCCGT CCTCGCTCGG
GTCGGCATCC ACCTGTACAT GGGCTTGCCG GGCTTGGGGG CGGCAATATT CGCCCTGGTC
AACATCCGCC TGTTCGAGCG CACGGGCCGA GTGGCGCCGC TGATCCTCGC CCACGCCTGT
TTCGACTGCG CCACCATCAC CGGCAACCGG ACTGTGCTCT ACGTCTTCAT CAGCGCCGGC
GCATTGATGC TGCTGTACCC ACCCAGCTTC CTGCCGCGAC GCCGCGCCAC TGAACAGAAC
CGCGGCGACA GGCCCCAGCA CCAACCGGCG ATGGAAGCAG CCCGCACCGG AGGCCCGTCG
TGA
 
Protein sequence
MLMSVPTPAA PPPIRATYAY PAILAVYAAV FGAAAFTWTA LLLYTYHALP EAWMAAILRH 
QNGADVVPAV LAGLAALMIC AALITSERGK QIVVFNSPGR RVTALGIIAA ALIPVEWALR
HVQLLESDDL TPRIVELVGS AALAGALAVV LAAPEPAELG IGGRKHRSIT EFYALARTSL
LGLLGSLAAV NLILYGLKPP ALVGPVGPGS GMVESFWFWI AVACVNAVVE EGICTAWLYA
LLHRAGRPRY EIYAVAVLAR VGIHLYMGLP GLGAAIFALV NIRLFERTGR VAPLILAHAC
FDCATITGNR TVLYVFISAG ALMLLYPPSF LPRRRATEQN RGDRPQHQPA MEAARTGGPS