| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4007 |
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| Symbol | |
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| ID | 8335360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4539041 |
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| End bp | 4540492 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644957116 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_003114719 |
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| Protein GI | 256393155 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.174227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00583447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAATACTG CCGAGCCGCT CCCGGACGTC GATGACGCCT GGATGCGGGT ACTGAGGATC
CAGTGCAAGC TGCACCGGTG GGCGACCGAC GACCGGTCGC GCACGTTCGA TGATCTGTTC
AACCTCGTCT GCGATCCCGC GACGCTCGTC ATGGCGTGGG ATCGAGTTCG GGGCAACAAG
GGCTCCCGCA CGGCTGGGAT CGATGGCCGG ACCGTCAGCA GGATCGAAGG TCAAGGCGTC
GAGGAGTTCC TGGCCGGACT GCGGGAGTCG TTGAAGTCCG GGGAGTTCTG GCCGGTCCCG
GTGAAGGAGC GGATGATCCC GAAGGCGAAC GGCAAGCTGC GTCGCCTGGG GATCCCGACC
GTCGCCGACC GGGTGGTGCA GGCGGCTCTG AAGCTGGTTC TAGAGCCGAT CTTCGAAGTG
GACTTCGAGC CGTGTTCCTA CGGCTTCCGT CCCAATCGGA GAGCGCACGA CGCGATCGCC
GAGATCCACC ACTACGCCTC GCGTGGTTAC GAGTGGGTGT TGGAAGGGGA CATCGAGGCG
TGCTTCGACA ACATCGACCA CACGGCCCTG ATGGGCCGAG TGCGCGAGCG GGTCGGAGAC
AAGCGCGTGC TGCGCCTGAT CAAGGCGTTC CTGAAGTCCG GCATCTTCTC CGAGGGCCGC
GCCGTCAGGG ACACCCGCAC CGGGACGCCC CAAGGCGGCA TCTTGTCGCC GTTGCTGGCC
AATGTCGCGC TGGCGGTGCT CGACGAGCAC TTCGCTCAGG TGTGGCAGGA AACCGGCCGG
ACCTGGGCGG CCAGGGACTG GCACCGGCGT CGCGGCGGAG CGACCTTCAA GCTGGTCCGC
TACGCCGACG ACTTCGTGAT CTTGGCTTAT GGTTCCCGGC AGCATGTCGA GGACCTGACG
GCCGACGTCG CGCAGGTGCT GTCCACGGTC GGTCTGCGCC TGTCGCCGAC CAAGACCGCG
GTCGCCCACA TTGATGAGGG GTTCGACTTC CTTGGGTTCC GCATCCAGCG GCACCGCAAG
AGGGGGACGG ACAAAAGCTA CGTCTACACC TATCCGAGCA AGGCCTCGAT GCAGGCCGTG
ACGAGGAAGG CCAAGGCGAT CAGCAGACAG AGTGTCGAGC ACCCGCTTGA GGACGTGCTC
AAGCAGCTGA ACTGGCTGTT GAAGGGGTGG GCGGGCTACT TCCGCAACTC TGCGGCCAAG
GCGAGTCTGA ACTACCTGGG CTACTACACG TGGCACCGGG TCTGGCGATG GATCCGCCGC
AAGCACCGCA GGGTCCCGTG GAAGAAGCTC AAACGCCTCT ACCAGGGCAG TCAGGTCGGT
GCGACCTGGT GGCCTGAGCA CAACGGGATA CATCTGTTCA ACCCGGCGAC GGTGGAGATC
GTCCGCTACC GCTACCGGGG AACGCGCATC CCGAATCCGT GGAGCAGGTA CGCGCAACTG
GCCGACCGGT AG
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| Protein sequence | MNTAEPLPDV DDAWMRVLRI QCKLHRWATD DRSRTFDDLF NLVCDPATLV MAWDRVRGNK
GSRTAGIDGR TVSRIEGQGV EEFLAGLRES LKSGEFWPVP VKERMIPKAN GKLRRLGIPT
VADRVVQAAL KLVLEPIFEV DFEPCSYGFR PNRRAHDAIA EIHHYASRGY EWVLEGDIEA
CFDNIDHTAL MGRVRERVGD KRVLRLIKAF LKSGIFSEGR AVRDTRTGTP QGGILSPLLA
NVALAVLDEH FAQVWQETGR TWAARDWHRR RGGATFKLVR YADDFVILAY GSRQHVEDLT
ADVAQVLSTV GLRLSPTKTA VAHIDEGFDF LGFRIQRHRK RGTDKSYVYT YPSKASMQAV
TRKAKAISRQ SVEHPLEDVL KQLNWLLKGW AGYFRNSAAK ASLNYLGYYT WHRVWRWIRR
KHRRVPWKKL KRLYQGSQVG ATWWPEHNGI HLFNPATVEI VRYRYRGTRI PNPWSRYAQL
ADR
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