| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3999 |
|---|
| Symbol | |
|---|
| ID | 8335352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4530131 |
|---|
| End bp | 4531042 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644957112 |
|---|
| Product | 4,5-dihydroxyphthalate decarboxylase |
|---|
| Protein accession | YP_003114715 |
|---|
| Protein GI | 256393151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.214743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00546474 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCCA CCTTCGAGAC GGCGCCGCTG GTCACGGACA TCTTCCGGCC CATGATCGAA
GGGCGGTACG ACGTCGCAGA GCTCGGGCTC ACCTACTTTC TGCGGACCTT CGACCCCGAC
GACCCGCGGT ATCTGGCACT GCCGATCATG CCCAACCGAA ACTTCCGGCA CTCGGCGGTC
TTCGTCAACA CGGCCAGCAG TATCCGTACC CCACAGGACC TTGCGGGCCG GACCATCGGC
GAGTTCGCGC TGTACGGCCA CGACCCGGGC GTGTGGGTCA AGGGCATCCT GGCCGAGGAA
TACGGCGTCA CACCGGAGCA GTGCCGCTGG GTCATCGGCG GCACCAACCA CCCGATTCCG
GCCTTCGACT GGCTCCCTCA GCCGGTACCC GCCGGGGTCG ACGTCTGCCG CGCTCCCGAG
AGGGCGACTT TGGACGCGAT GCTGAAGGCG GGCGAGATCG ACGCGCTGAT CTCGGTCGAC
GTCCCGCAGT CCGTGATGCA GGGTTCGCCG AGGACGGCCC GGCTGTTCCC CGACTACGAC
GTCGTAGAGC GGGACTACTT CCGGCGTACG GGAATCTTCC CGCCGATGCA CATCGTTGCG
ATCCGCACCG AGGTCGCTCA GGATCCTGAT GTGGTGCGAG CTGTCTACCG CGCGTTCTGT
GAGGCGAAGG ACCTGGCCGC GCAGAGGTAC CTGGATGAGG CGGTGAAGCA GCACATGGGT
GTCATGACGC CTTGGTTCAG CAAGCTCTTC GCGGACAACC GCAGCCTGTT CGGAGACGAC
TGGTGGCCGT ACGGGGTGAA GGCTAACCGG AAGGCCGTCG ACACTTTCCT CCGGTACCAC
TATGAGCAGG GCCTATCGGG GCGGCTGCTG ACGTGCGAGG ACATCTTCGT GCCCGAGCTG
CTCGCGGTGT GA
|
|---|
| Protein sequence | MDATFETAPL VTDIFRPMIE GRYDVAELGL TYFLRTFDPD DPRYLALPIM PNRNFRHSAV
FVNTASSIRT PQDLAGRTIG EFALYGHDPG VWVKGILAEE YGVTPEQCRW VIGGTNHPIP
AFDWLPQPVP AGVDVCRAPE RATLDAMLKA GEIDALISVD VPQSVMQGSP RTARLFPDYD
VVERDYFRRT GIFPPMHIVA IRTEVAQDPD VVRAVYRAFC EAKDLAAQRY LDEAVKQHMG
VMTPWFSKLF ADNRSLFGDD WWPYGVKANR KAVDTFLRYH YEQGLSGRLL TCEDIFVPEL
LAV
|
|---|
| |