| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3981 |
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| Symbol | |
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| ID | 8335334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4515396 |
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| End bp | 4515980 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957095 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003114698 |
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| Protein GI | 256393134 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.261067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGAC GTGCCGGTTC GAAGAGCCTC GATGAGGAGC GGCCGTCGGT CGAGACGTTG
CTGCACCGCG TCGCGCTCGG CGATCGCGAG GCGTTCGACG CCGTCTATGA GCACCTTGCC
GGCCCGATTC TCGGAACGGC GCGCCGGGTG CTGCGCGATC CCGCGCAGGC CGAAGAGGTC
ACGCAGGAGG TTCTGGTCGA GATCTGGCGT ACCGCCAGCC GTTTCGATCC GACCCGTGGT
TCGGCGCGGG CTTGGGCACT GACCATGGCA CACGCCCGCG CTGTGGACCG GGTGCGATCG
GCCGACGCGA CCGCCCGCCG GGAAGCGCGG GCCGCCGAGC TGATGGTCGA GCAGCCCTTC
GACCAGGTCG TCGAGGCCGT TGAGGCGCGA CTGGACCGGC AGCGAGTGCG CCGCTGCCTG
GAAGGCCTGA CGGAATTGCA GCGCCAGTCT GTGACGTTGG CCTACTACGG CGGATACACG
TATTCGCAGG TCGCGAACCA ATTGGATACC CCACTGGGTA CCGTGAAGAC GCGGCTGCGC
GACGGTCTGA CCCGGCTCCG AGACTGTCTG GGGGTGGGAG GATGA
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| Protein sequence | MLGRAGSKSL DEERPSVETL LHRVALGDRE AFDAVYEHLA GPILGTARRV LRDPAQAEEV
TQEVLVEIWR TASRFDPTRG SARAWALTMA HARAVDRVRS ADATARREAR AAELMVEQPF
DQVVEAVEAR LDRQRVRRCL EGLTELQRQS VTLAYYGGYT YSQVANQLDT PLGTVKTRLR
DGLTRLRDCL GVGG
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