Gene Caci_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3976 
Symbol 
ID8335329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4511765 
End bp4512214 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID644957090 
Productblue (type 1) copper domain protein 
Protein accessionYP_003114693 
Protein GI256393129 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.262484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.466824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGAA CCCTGCGACG CGTCGCGATC CCGGCCGCGG CACTGCTTCT CGCTGCTGCG 
GGCTGCTCCT CAACCGCGTC CACCGGCAAC TCGCAACCCA CGACACCGCC GAGCTCCCCC
ACCACGCCCT CGACGACGGG CCCGGCCTCG CCGTCCGCGC CCTCGACGAC CACAGCCCCG
AGTCAAGCAC CGACAACGGC CGCGCAGATC GTCATCGACA ACTTCGCGTT CAGCCCGGCG
AACCTCACCG TGCATCCCGG ACAGAGCATC ACGGTCGTCA ACCACGACTC CACGACCCAC
ACCCTGACAG CCGGCTCCGG CGGCGCCTTC GACACCGGAG CCATCAACCC CGGCAAGTCC
GCGACGATCA CGGCTCCGGC CACCGCAGGC ACATATCCAT ACGTCTGCAG CATCCATGCA
TCGATGCACG GCACGCTGAC AGTCGGATAG
 
Protein sequence
MLRTLRRVAI PAAALLLAAA GCSSTASTGN SQPTTPPSSP TTPSTTGPAS PSAPSTTTAP 
SQAPTTAAQI VIDNFAFSPA NLTVHPGQSI TVVNHDSTTH TLTAGSGGAF DTGAINPGKS
ATITAPATAG TYPYVCSIHA SMHGTLTVG