| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3971 |
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| Symbol | |
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| ID | 8335324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4504691 |
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| End bp | 4507873 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644957086 |
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| Product | helicase domain protein |
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| Protein accession | YP_003114689 |
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| Protein GI | 256393125 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00406642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.666286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCATA CCCATACTCC GAAGCCGCCA GCGGTTGTCA CCAACGGCGA CGGAGCCTCC
GTCCTTACCG CGGCGGGGAA CTGGCTGTCC GATATGGCTC CTGGATCGCA AGGCTCAGTC
GTATCACTGG CCGCCGGATA CCTGAGCATC CACGGCCTGA TGCTACTGAC CGGCCGGCTG
AGGGCTCTGC TGGACAATGG GGCAACGCTT CGGCTGCTGT TCGGTGTCGC CCCGACCGGC
ACGGCAGCCG TCACCGTCGA TGCTGGGGAC AAGGACATCG CCGACCTGCC CGAGCTGCTG
GCCGCGGACG AAGGCGCGCT GCGCGCCGAG ATCGCAGGGA TCCCGATGTC AGCGGCCAAC
GCCAGCCGCC TGGCTGACTT GCTCAGCGTG CTGTCCCACA AGGATGTCGA GATCCGACGA
TTTGAGCGTG GCTTCTTTCA CGCCAAGGCT ATTGTCGCGG ACTATCCAGT TGGCGCGGTT
GCCCTAGTCG GTTCCTTCAA CCTGACTCGT GGCGGCATGC TCAGCAACAT CGAACTCGGT
GTCGGTGTCG CTCGTTCCCA GGGCCGGGCG GTGGCCGAAC AGGTCCACGG CTGGTGGAAC
CAATCCGAGC CCTACGACCT CAACGAACTC ATCTCCACTC TGTTTCTGCT GGCTCCCATC
GAACTCGTGT ATCTACGGAT CCTCTCCGCG CTGTTCGCCG AGGAACTCGC GGTGTGTGCC
TCGCCGATCG GGCTTACCGG TTTCCAGGAG GCAGCGGTTG CCAAAGCGCT GCTCACACTT
CGCCACCGTG GCGGCGTGCT GCTGGCTGAC GACGTCGGCC TTGGCAAGAG CTATATCATC
GCCGACCTCG CCCGTCGTGA AACGATCGCC GAAGTAGGCA CTGCCCGGAT CGCGCTATTC
TGCCCCGCGC ACCTGAAACC CATGTGGCTG GCCTACAAGA ACCGTTGGAA TCTGCATGTT
GACATCCACA GCTACAACGC TCTGTCTGAT ATGTACAAGA AGGTCCGCCG TGGCGGCGGA
GTCTGGCATC AATATTCGAT GATCATCTGC GACGAGTCGC ACTACTTGAA CAATCGCGAC
CGCAAGCGTT ACAAAGCACT GGTAGACCTC CTTGCGGCCA AGGGCAGACG CCCAAAGATC
ATCCTGGCCA CTGCCACGCC AGCCAACAAC AGTGGCGAAG ATTTGGCAAC GCAACTCAAC
CTCGCCTGCC CGTTCCCAGA GACCGGACGT CCCCGCGCCC ATGGCTGGTC GCCGTGGCCG
ACCGTGCGCA TGTCCAGAAC TCGGCTGTTC GACCTGTGCC GCCATGCGAC CAAGCTGCCG
AAGCCCGTCT TGAGGGACCT CCACGCTGAG ATCGATGCCC TCACCGTGCG GCGCACTCGC
CCGTTCATCA AGGCGACATG GGCCAGTCCC GCCAAAAGCC TGCAATTCCC TGTCGTGCGG
CAGCACGCCC TCTACTACCA ACTCGGCGAC CAGATGCGCG ACCTGTTCGC CGACGTGCTG
GACGCAGCAA CCATCGGGCC GGCGGCCAAG GACGATCAGT TCCGAGCCGC CATGCGAGAC
CTGCGCGGAC CGACCGCGCG GGTCAGGCCA CTGACGCTGG CGGCGTTCAT GCCCCAGTGC
TACGCACTCG ACGAGGCGCC GCCATTGTGG ACCGATCTCC TGCCGGCCCT GATGAAGATC
GCCCTTCTGA AACGGATCGA ATCTTCCACC GCGGCCTTCG CTGTCACCGC CGCTGTCCTG
GCTCAACGTA CCCAGGAAGC AATCGACGAG CTCGATCGGC GTGACCGCGT CCGCATTACC
ATTGGCCGCG AACGCCGCGA TCGTTTGCAG GACCTCATGG CTGCGCTGCT CGACCAAGGC
GCGGACCGGG AGCGCATCGA CGCCATCTTC ACAAACCTGC TAGATGGGGA CAGCAAGCTC
GGACCGGCAG GCGGCATCCC GCACTCGATG TACCGTGCCG CGCACCGATT CGACCGCGAA
CGCTTGTCGC AGGACCTGCA GGCCGACCGG GACACGCTCG AACAGTTCGC TGCACGCGCC
GCCGCTGCGA CGGCCGCTGG CGATCCCAAG GCCGACGCGT ACACCACGTT GCTGGACGCC
ATCGCTGGTA AGACGCTCAC CTTCGCTGCG GCCCGGGCCA CGACCGCCGA CCTGGGATTG
CGTATCGATG CCCACCTCGG CGCCGGCGGC GCGCCGCACT ACGCTGGACG TTTCGCCACT
ATCGGTACGA AAGACCCGCC GACCAAAGCA ACAGTTGCAC GGATCCTGGC TGGCTACTGT
CCCAAAACCG CCTCCGCAAC GGAGGCCCTT GGGACTCGCC GCTCCCGTGA CGAGTACGAC
TTATTGCTGG CCGGCGACGG AATCTCCGAA GGCGTCAACC TCCAGCAAAC CCGCGTCATC
ATCAACTACG ACCTGCCCTG GGCCCCCGGT CGACTCGCCC AGCGCATCGG ACGTGCCGAT
CGCATTGGCT CACCCCACAA GGTCATCGAC GTCTACACCG TTCTGCCAGA CCAGGTGCTG
GACGCTTACC TGCGGCTAAT GGACACCCTT GCCGCTAAGG CCGAAACTGC CGCCGTCCTG
GTCGGCTCCA CCACCGCACT GTTCCCCGGA GCTGCCATTC GGCCGCTGAA CTTCACTGCC
ATGTACGAAG ATCTCGTCAA GCCCGACAGC GAGCCCGTCA TCGATGTACC GCCGTCAGAA
ACGCGCCGAG CAGTTGCGCG GCGCGCGCAC GATGAACCGA CGGTCGCTCG CCGGTTGGCC
GAAGCGACCA CATGGGCCGG AGCAATTCAC CCTGAACCTG CCGATGACCC AGTCGCAGTC
TTCTGTTTTG AGCTGCACGG CGTCGAAGGT CAGGCCGCGG TGCCGGTCCT GTGCCTGGTT
GGAGCCGGAC GCCGCCTCGG CTTCATCACT ACCGACCCCG AAGTGTGCTT GGCCGAGATC
GAGGTTGATC CCACAGACTG GATGGAGCAG GTCGCAGCCG GCACGCATAC CGACCTGCGA
GTGCCGACCC CACCTGCTGC CCACCAGCTC ATTTTCGAGC TGTGTGCACG GGCCAAGTCA
GACCTGGCGT CCACCTATGG AATCGACCAC GATCACCTCG ACGAACGTCT CCGGCTCGTC
GGCTGGATCC TGCGCCCCGA CAAGAACATG GCACGGGCCG CCCGTGACAA GTGCTGCTAC
TGA
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| Protein sequence | MSHTHTPKPP AVVTNGDGAS VLTAAGNWLS DMAPGSQGSV VSLAAGYLSI HGLMLLTGRL
RALLDNGATL RLLFGVAPTG TAAVTVDAGD KDIADLPELL AADEGALRAE IAGIPMSAAN
ASRLADLLSV LSHKDVEIRR FERGFFHAKA IVADYPVGAV ALVGSFNLTR GGMLSNIELG
VGVARSQGRA VAEQVHGWWN QSEPYDLNEL ISTLFLLAPI ELVYLRILSA LFAEELAVCA
SPIGLTGFQE AAVAKALLTL RHRGGVLLAD DVGLGKSYII ADLARRETIA EVGTARIALF
CPAHLKPMWL AYKNRWNLHV DIHSYNALSD MYKKVRRGGG VWHQYSMIIC DESHYLNNRD
RKRYKALVDL LAAKGRRPKI ILATATPANN SGEDLATQLN LACPFPETGR PRAHGWSPWP
TVRMSRTRLF DLCRHATKLP KPVLRDLHAE IDALTVRRTR PFIKATWASP AKSLQFPVVR
QHALYYQLGD QMRDLFADVL DAATIGPAAK DDQFRAAMRD LRGPTARVRP LTLAAFMPQC
YALDEAPPLW TDLLPALMKI ALLKRIESST AAFAVTAAVL AQRTQEAIDE LDRRDRVRIT
IGRERRDRLQ DLMAALLDQG ADRERIDAIF TNLLDGDSKL GPAGGIPHSM YRAAHRFDRE
RLSQDLQADR DTLEQFAARA AAATAAGDPK ADAYTTLLDA IAGKTLTFAA ARATTADLGL
RIDAHLGAGG APHYAGRFAT IGTKDPPTKA TVARILAGYC PKTASATEAL GTRRSRDEYD
LLLAGDGISE GVNLQQTRVI INYDLPWAPG RLAQRIGRAD RIGSPHKVID VYTVLPDQVL
DAYLRLMDTL AAKAETAAVL VGSTTALFPG AAIRPLNFTA MYEDLVKPDS EPVIDVPPSE
TRRAVARRAH DEPTVARRLA EATTWAGAIH PEPADDPVAV FCFELHGVEG QAAVPVLCLV
GAGRRLGFIT TDPEVCLAEI EVDPTDWMEQ VAAGTHTDLR VPTPPAAHQL IFELCARAKS
DLASTYGIDH DHLDERLRLV GWILRPDKNM ARAARDKCCY
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