| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3958 |
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| Symbol | |
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| ID | 8335311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4494390 |
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| End bp | 4495439 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957077 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003114680 |
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| Protein GI | 256393116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0131917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.325854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGGA TCGGTGGGGG ATTACTGCTG GCCGGCTCGC TTCTCGTCGC GGGCGTGACC
TTGTTGTCCT ATATGCGGGA CCGGGATCTT CCGCCTCCTG ATTCACGCCC CATCTCGCTG
ATCTTGTGTC TACCCGCCGT GATCGTGGGA GTCTTCCTCG TTCTGAGCCG CGCGTCCGTG
CCCGGCTGGT TGGTGAACAT CGCGCCGGGC CTGGCGGCGG TGTTGATCTG TATCCCGACA
GTGGTGGACG GGCGCCCCGG ACCCTTGGGC CCGGTGTTGT TGACCTGGAC CGTGGTGTAC
TCGGCCTACA TGCTCGCGAT CCATGTCGCT TGGATGACCA TGGGGGTGGT CGCGGCATCG
TTCGCCGCCG CGGCGTTCGC CAGCCGCGGA GTGGACGGCA CCGACCTGTG GATCGCGGTG
ACCTCCGCGA TTTTGGTGGT GTTCATGCTG GTCATCCGTC TACGAAGCCA GTCGGATCGG
CTGAGCGCAC AGCTGATCGC GCTGGCGCGC GCCGACCCGC TCACCGGTCT GGTCAACCAC
AGGGGCTTTG AGGAAGCGCT GGGCAGGGCC CAGGTGCGCC ACTCGCGGGA TGGTCGGCCA
GTGTCGCTGC TGGCCATCGA CATCGATCGG TTCAAGGACG TCAACGACAC GTGGGGTCAT
CCCGCCGGCG ACGCGGTGCT GCAGGAGTTG GCCAAGCTGC TCGCCGCCTA CTTCCGCAGC
GGCGACGTGA TCGCCAGGGT CGGGGGCGAG GAATTCGCGG TCCTGATCAG CGACTGCGGC
GTGCACGAGG CGCTCAGGCG CGCCCAGGGT TTGCTGGGGC GCGTCCGCGA GGATTCGCTG
ACGTGGGACC ACCGGATCAC GGTGAGCATA GGCGTGGCGA CGGTTCCCGA TCAGGTCGAG
GATTTCGATG GTCTGCACCG TAGCGCCGAT CGCGCTCTGT ACCGGGCGAA GAAGGCCGGC
CGCGACGGGG TGGTCAGCGC GAACAGCGGC AATCTCGTCA CCGGTTCGGA TGAGGCGGAC
GCGGGGCGCC GGAATCCGTT AGTCCGATAG
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| Protein sequence | MGRIGGGLLL AGSLLVAGVT LLSYMRDRDL PPPDSRPISL ILCLPAVIVG VFLVLSRASV
PGWLVNIAPG LAAVLICIPT VVDGRPGPLG PVLLTWTVVY SAYMLAIHVA WMTMGVVAAS
FAAAAFASRG VDGTDLWIAV TSAILVVFML VIRLRSQSDR LSAQLIALAR ADPLTGLVNH
RGFEEALGRA QVRHSRDGRP VSLLAIDIDR FKDVNDTWGH PAGDAVLQEL AKLLAAYFRS
GDVIARVGGE EFAVLISDCG VHEALRRAQG LLGRVREDSL TWDHRITVSI GVATVPDQVE
DFDGLHRSAD RALYRAKKAG RDGVVSANSG NLVTGSDEAD AGRRNPLVR
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