| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3954 |
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| Symbol | |
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| ID | 8335307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4491566 |
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| End bp | 4492117 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957073 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003114676 |
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| Protein GI | 256393112 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00776564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0886939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGACCAC CGCGCATCAG CCGCGCCCAA GTCCTCGACG CAACCTTCGA CCTTGCGTCG
GAGGCTGGTC TGGCAGCGGT CACCATGCGT GCCGTCGCCG CCCGGCTCGA CGTCACGCCG
ATGGCTCTCT ATCGGCACGT CGGCGACAAA CAGGGACTGC TCGACGGTCT GGTAGAGCGC
CTGATGGCCG AGATCACGGT GCCCGATGTG GCGCCGGAGG AGGATTGGCG TGCTGTGTTG
CGGTCCATGG CACGCAACAT CAGGGCTGTG GCACGCCGCT ACCCGGACGT GTTCGTGCTG
CTCTTCCAGC GGCGCGCCGT CACGGAGGGC GCCCAAGGCC CGCGGCAGGT GGTGTTCCGG
GCGCTGCGTG CGGCAGGTGT TCCTGAGGGA GAACTCGCTG GCACGGAGCG CATGCTGTCC
ACATTCGTCT ACGGATTCGC CGCTTCAGAG GCCGGAGGTC GATTCGCCGG TCTCAACATC
GAGGCCGAGT TCGACTACAC GGCGGGGCAC GTCGAGAAGC TCATCGAAGC GCTTGCCGCA
GACAGCCGCT GA
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| Protein sequence | MRPPRISRAQ VLDATFDLAS EAGLAAVTMR AVAARLDVTP MALYRHVGDK QGLLDGLVER
LMAEITVPDV APEEDWRAVL RSMARNIRAV ARRYPDVFVL LFQRRAVTEG AQGPRQVVFR
ALRAAGVPEG ELAGTERMLS TFVYGFAASE AGGRFAGLNI EAEFDYTAGH VEKLIEALAA
DSR
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