| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3944 |
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| Symbol | |
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| ID | 8335297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4481657 |
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| End bp | 4483774 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644957065 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003114668 |
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| Protein GI | 256393104 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0198084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGCA ACGACGTCTC CGGTTCAGTG CACAGCCTCG TACAGGGCCG AAGCTTCGAC
AACGCGACGA TCAACTTCTT CGGTGGAGTG TCCCGGCTCC CGTTGAGTGC CCCCGCCATG
CTGCCGCCGA GTCACGGTCC TTACACCGAC CGGCACGCGG TGCACGAACG CCTGGACCAA
CTCGCCGATC GGGAGGTCGG GATGGTCCAG CTCGGCGGTG TGGCCGGTGT GGGTAAGTCG
TCAACAGCGA TGCGGTATCT GCGCAGCCGC AGCGAGCGCT ATCGCGGAGG CGTCTACTAT
GCAGACCTCG GCGGCGGTCG CGCCGGGCGC GGAGTGTCCG TGGCCGAGGC GCTGGACGGC
TGGCTCGTCG CGAAGGGCGT GCTGTCGAGC GAGGTGCCAC CGAGTCTGGC TGCGCGCTCC
GCGCTGTTCC AGCGGATTAC CGCCGATGAG CCCGTTGCGG TCCTGATCGA CGATCCGGCG
AGTGCGGCGC AGGTCGCGGC GCTGTGCCCG ACGTCTCAGG GCAGTTTGAT CATGGTCACC
GGGCACCACG AGCTCGCCGG GATCCGGACA TCCCACAGTG CGGAGTTCCT GCGCGTGCCC
ATGCTGGACC ATGCATTCGC CTTGGAGCTG CTCACGGACT TGGTCGGGGA GGATCGAGTC
CAGGCCGAAC AGGCGGCCTT CGATCAACTG GCGGCGTTCA GCGAGGGTCA TCCGCTGATG
CTGCGCGTCA TCGCCGCAGA GCTGAGCCGT GGACGGTGGG ACAGCGCGGG GGAGTTGGCA
CAGCGACTGG CCGACACTCG TAGCCGTCTT CGCGCGTCGG ACCAGATCAT GTCATCGGGG
GGTGACTACT CCGTGAACGC AGCCCTGGAG TTGAGTGTCA GAGGTCTCCC TGAATCCGGA
CGGGCCCTTC TGCGTGCGCT GGCATCCCAT CCCGGATCCG AGTTCGGTCC AGACCTGATC
GACTTCCTGG GTTCGGACTT CAGCACGTTG GCAGATCTGG TCGAGTCGGG TCTGGTCACC
GTTCTCCATG AGCCTGGAAC GCCCCGCTCC TCGCGGCGCT GGCGCCTGCA CACGCTGGTG
CAGGATTTCA TTCGGCGTGA AGAGGCAGCC GACTCGGTGG CCTACGTCAG CAGCCAGAAG
GCGATCATCG GTTGGTACTT GCGGCGTACT GCGGTAGCTG ATCGAGCCCG CTCTCCCCGC
TGGCATGTCG GGCCCGATTT TGACGATGAG CCGCCCTTCG GCGATGTTGA CGCCGCTGTC
AGTTGGCTGG AGGCCGAGCA GGCGAACCTC CGAAGTGCGG TGGTCGCTGC GTCAGAACTC
GGCGACGACA ACACGGTGTG GCAGTTGTGC GAGGTTTTGT GGGGTTTGTA TTTCTGGAGC
AATCCTTTCG GGGACTGGAT CGACACTCAC CACCTCGGCA TCGAATCGGC GGTGCGTCTT
GGCAACCGGG CGGCTGAGGC GCGCATCAGG CTGCAGCTCG GGTTCGCCTA CTACAACCAG
GACGACATAG AGCAAGCCGC TGCAGAGTTC GCCTCCGCCT TGTCGCTGGC TGAGGACAGC
GGAATGGTCA AAGTGCTTGC GGCCGCGATT GAGTCCGCCG GTTTGGCTGA TTTGCGGCTC
GGACGTCCAG CCCAGGCTCT TGACCGCTTC GAGGAGGTGC TCGCGCTGGT CGAAGCCGAT
CCTGAGACGG GCCTGGCTGC TGTCGCCAAC GCGCAGCGGC ATCGGGCCAG GGCTCTCGGC
GCACAGGGCC GTTACGCGGA GTCGATCGCC GTTTTCACCG ACCACGCGAT CCCCACTTAC
CAAGCCGAAG GGAAGAGCAG CTACAACGTG GCTCGGACCC TCGTCGATCT CAGCGATGTG
CTGATCGCGG CCGGTCGTGC TGATGAAGCC GTGGAGCACC TGCACCTCGC GATCGCGGAA
TTCGGGCGTC TGCGCAATCC GCTGCAGGGT GCGGTGGCTC TGATCGCGCT TGCCTCCGCG
TACGAAGCGT TCGCCGACGT CGGCAACGCG GCGGACGCTT TGACTCGCGC GGCGGAGGTC
TATGAGGCGC TCGGTTCTCT TAAGGCAGCT GACGTCCGCG CTCGTGCCCA GGCACTGCGA
GGGGGAACCG AGCGCTGA
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| Protein sequence | MVGNDVSGSV HSLVQGRSFD NATINFFGGV SRLPLSAPAM LPPSHGPYTD RHAVHERLDQ
LADREVGMVQ LGGVAGVGKS STAMRYLRSR SERYRGGVYY ADLGGGRAGR GVSVAEALDG
WLVAKGVLSS EVPPSLAARS ALFQRITADE PVAVLIDDPA SAAQVAALCP TSQGSLIMVT
GHHELAGIRT SHSAEFLRVP MLDHAFALEL LTDLVGEDRV QAEQAAFDQL AAFSEGHPLM
LRVIAAELSR GRWDSAGELA QRLADTRSRL RASDQIMSSG GDYSVNAALE LSVRGLPESG
RALLRALASH PGSEFGPDLI DFLGSDFSTL ADLVESGLVT VLHEPGTPRS SRRWRLHTLV
QDFIRREEAA DSVAYVSSQK AIIGWYLRRT AVADRARSPR WHVGPDFDDE PPFGDVDAAV
SWLEAEQANL RSAVVAASEL GDDNTVWQLC EVLWGLYFWS NPFGDWIDTH HLGIESAVRL
GNRAAEARIR LQLGFAYYNQ DDIEQAAAEF ASALSLAEDS GMVKVLAAAI ESAGLADLRL
GRPAQALDRF EEVLALVEAD PETGLAAVAN AQRHRARALG AQGRYAESIA VFTDHAIPTY
QAEGKSSYNV ARTLVDLSDV LIAAGRADEA VEHLHLAIAE FGRLRNPLQG AVALIALASA
YEAFADVGNA ADALTRAAEV YEALGSLKAA DVRARAQALR GGTER
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