Gene Caci_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3941 
Symbol 
ID8335294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4478441 
End bp4478635 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content61% 
IMG OID644957062 
Productprotein of unknown function DUF397 
Protein accessionYP_003114665 
Protein GI256393101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.272319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0398541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAT GGGGCGCATG GCGCAAGGCC CAGGCGAGCG GTAGCGGCAG TGGCTGCGTA 
GAGATGCGGA GCCACACAGA CGGTCGCCGC GAGGTCCGCG ACAGCAAAGA TCCCTCCGGG
TCGATACTGG CTTTCTCACG GTTCGAATGG CAATGCTTCA TCGACGGTGC CAAAAACGGC
GAATTCGACG ATTAA
 
Protein sequence
MDQWGAWRKA QASGSGSGCV EMRSHTDGRR EVRDSKDPSG SILAFSRFEW QCFIDGAKNG 
EFDD