| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3907 |
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| Symbol | |
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| ID | 8335260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4430839 |
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| End bp | 4432038 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644957033 |
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| Product | CRISPR-associated protein, Cse4 family |
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| Protein accession | YP_003114636 |
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| Protein GI | 256393072 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000018703 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.192043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCG TCATCCTCGA TATCCACATC CTGCAGACCG TCCCGCCGAG CAACCTGAAC
CGAGACGACA CCGGCTCCCC GAAAACCGCC GTCTATGGCG GTGTGCGCCG GGCACGTGTC
TCCAGCCAGG CCTGGAAGCG CGCCACCCGT CAAGCATTCG GAGATCTGCT GGACCCGTCC
GAACTGGGCG TGCGGACCAA GCGCGTCGCC GAACAGATCG CCAACCGGAT GACCGCGCTG
GAGCCGTCCC TGTCCCCCGG CGATGCAGTG GCTGTCGCAG TCGAGGTGAT CAAGGCTGCG
ACGGGGGCCA AAAGCGAGGT CCCAAAGCGG AAGTCAGCAG CAGTCAAAAG CGATCAGGAT
GCTACGGCCG CACTCCCGGA GACCGGCTAC CTGATGTTCC TCAGCGAAAG CCAGCTCAAC
AACCTGGCAC GCCTCGGGGT GGAAGGCTCC AAGGACATCA CGGCCTTCCT GAAAGACAAA
GACTTCAAGA ACCGGGTCCG GCAAGCCGCC GACACGCGCC ACTCGGTCGA CATCGCGCTG
TTCGGCCGCA TGGTCGCCGA CGCCACGGAC ATCAACGTCG ACGCCGCAGC ACAAGTCGCA
CACGCAATCA GCGTGCACGC CGTGGAGAAC GAGTCGGACT ACTTCACCGC CGTCGACGAC
CGTAGCACCG AGGCCGAGCC TGGGGCCGGC ATGATTGGGA TCGTCGACTT CAACGCGGCA
ACGCTTTACC GATATGCGGC AGTCGATGTG AACCGGCTGG CCGACAACCT CGGTGCCGGG
CTACTTGAAG GTGAGTCTCA GACCGAGCCC GTGCGGCGTG CTGTCGAGGC CTTCATCCGG
GGATTCGCAC TGTCGATGCC GACCGGGAAA GTCAACACGT TCGGCAACCA CACAGTCCCC
GACGTGGTCC TGGTCAAGCT ACGCGCCTCA CGCCCAATCA GCTTCGCCGC CGCATTCGAG
GAAGCCATCA GCGCCGGCGA ACACCAGGGC GGGTATCTCA AAGGGGCATG CGAGCGTTTG
GCCAGCTACA TCCCGAAGCT CGAGCAGGCC TACGACCTGC AGGAGGGTAC TGATTCCTGG
GTCGTCTGCG CGGGTTCGGC AACAGAAGCC CTTGAGCAGG CCGGCGATCC GGTGTCGATC
AGCCAGCTTG TCGCCGCTGT CGGGGCTGCA GTCACGACTC GGCTGGCATC TGACGCATGA
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| Protein sequence | MTRVILDIHI LQTVPPSNLN RDDTGSPKTA VYGGVRRARV SSQAWKRATR QAFGDLLDPS
ELGVRTKRVA EQIANRMTAL EPSLSPGDAV AVAVEVIKAA TGAKSEVPKR KSAAVKSDQD
ATAALPETGY LMFLSESQLN NLARLGVEGS KDITAFLKDK DFKNRVRQAA DTRHSVDIAL
FGRMVADATD INVDAAAQVA HAISVHAVEN ESDYFTAVDD RSTEAEPGAG MIGIVDFNAA
TLYRYAAVDV NRLADNLGAG LLEGESQTEP VRRAVEAFIR GFALSMPTGK VNTFGNHTVP
DVVLVKLRAS RPISFAAAFE EAISAGEHQG GYLKGACERL ASYIPKLEQA YDLQEGTDSW
VVCAGSATEA LEQAGDPVSI SQLVAAVGAA VTTRLASDA
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