| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3903 |
|---|
| Symbol | |
|---|
| ID | 8335256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4428058 |
|---|
| End bp | 4428408 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644957029 |
|---|
| Product | CRISPR-associated protein Cas2 |
|---|
| Protein accession | YP_003114632 |
|---|
| Protein GI | 256393068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0712399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA TCGTTCTGAC CCTGTGCCCG GTCGGGCTAC GAGGCCTACT CACCCGCTGG
CTACTGGAAA TCTCAGCCGG CGTCTTCATC GGCAGCCCCT CAGCCCGCGT CCGCGACCTC
CTCTGGGACG AAGTCACAAG CCACGCAGGC AAAGGCAGAG CCCTGCTGGC ATACACGACG
GACAACGAAC AAGGCTTCGC CTTCCGAACC CACGACCACG CCTGGCACCC CGTCGACCAC
GAAGGCCTCA CCCTCATCCA CCGGCCGACC GAACGACCGG CCGCAACGTC GCAGCCAGCC
AAGACCGGCT GGAGCAAAGC TGCACAGCGA CGGCGATTCG GAAACAGCTA A
|
|---|
| Protein sequence | MTVIVLTLCP VGLRGLLTRW LLEISAGVFI GSPSARVRDL LWDEVTSHAG KGRALLAYTT
DNEQGFAFRT HDHAWHPVDH EGLTLIHRPT ERPAATSQPA KTGWSKAAQR RRFGNS
|
|---|
| |