| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3897 |
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| Symbol | |
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| ID | 8335250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4420401 |
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| End bp | 4421957 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957023 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003114626 |
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| Protein GI | 256393062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0429353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGC TCGATCTTTC ACAGTCCCCG CGCCGCTGGC CGGCCCTCGC GGCCCTCACC
CTCAGCGTCC TGATCGTCGG CCTCGACGGC ACCGTCATCA ATGTGGCCCT GCCGACGATC
GCGGGCGATC TGCACACTGA CAGCGCCCAA CTGCAGTGGA TCAGCGGCGG CTACCTGCTC
GCTCTGTCAG TGGCGATGCT TCCGGTCGGT CTGCTGGGCG ACCGCTATGG CCACCGGCGA
TTGCTGCTCT CCGGCATAGC CGTGTTCGGC GCCGCTTCCC TGGTCGGCTC ACTGGCCGAC
TCGCCGACCG CGGTCATCGC GGCGCGCGCG GTCCTGGGTC TGGGCGCCGC CGCGATCCTG
CCGTTGTCGA TGGCGATCCT GCCGCGGGTC TTCAGCAAGG ACGAGCAGCC CCGGGCCATC
GCCGTCTGGA CCGCCGCCAC GGCGCTCGGC ATGCCCGTCG GACCGGTGGT CGGCGGCTGG
CTGCTCAACC ACTTCTGGTG GGGCTCGGTC TTCCTGTTCA ACGTCCCGGT CGCCGTTGTG
GCGCTGGCTG CCGGCTTGTG GCTGCTGCCC CGCGATGCCG AACGGACGTC GGCCGCGCCG
CCGTTCGACA CCCTCGGCGC CCTGCTGGGC GGCCTCGGCA TCACCGCGCT CGTCTATGGC
ACGATCCTGA TCTCCGAGGA CGGGTGGACT GCTCCGTCCG TCCTGGCCTC GCTGTCCGCC
GCTGCCGCGC TGCTGGCCGG GTTCGTCGTC CGCGAGCGCC GTTTCCCGCA TCCGCTGGTC
GACTTCGCCC TGTTCGGCGA CCGCCGCTTC CGGTGGGGGA CGCTGATCGC GGTCTTCGTC
AACTTCGCGG TGATGGGGAT CTTGTTCGTG GTGCCGCAGT ACCTCCAGTC CGTGCTGGGG
AACGACGCCT TCGGCACAGG TATCCGGGTG CTGCCGCTCA TCGGCGGGCT GATGCTGTCG
GCGGCGCTCA GCGAATTCTT GCTGCCCAGG CTCGGCGTCC GGCTGGTCGT CACTACGGGC
CTGCTGGTGC TCGCGGCCGG CGTGCTGTTC GGCGCCACCA CCGGCGCCGC CGACGGCTAC
GGCTTCGCCG CCGGCTGGCT GGGCTTGACC GGCCTCGGCT TCGGGCTCGC AGTGGTGCCC
GCCACCAGCC TGGTCCTGGG GACGCTGCCC GACCACGGAA CCGGATCCGG CACCAGCCTG
TTGGAAACCA TCCAGCAGCT CGGGTCGGCG TTGGGCGTCG CGGGCCTCGG CAGCCTGCTC
AGCTACGGCT ACCTGGCCCG GCTGCACACC GGGCGGCTGC CGACATCGGA GGCCGACGCG
GCACGCGACT CGGTGTCCGA CGCCGACGCC CTCGCGGGGC AGCTGCACGA CGCCGGACTT
GCCGTGAACG CGCACGCGTC CTTCGTCCAC GGCATGAGCC TGGTCCTCCT CGTCTGCGGC
GTGATCGCCC TGCTCGGCGC CGGACTGGCC GCCGCCTTCC TCCCGCGGCA CGCCGGCGCC
CCGGGCGCCG GCCAGGTTTC CGGAACGGTG GCCGAACCCG CAGAATCGAT CGCATGA
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| Protein sequence | MPALDLSQSP RRWPALAALT LSVLIVGLDG TVINVALPTI AGDLHTDSAQ LQWISGGYLL
ALSVAMLPVG LLGDRYGHRR LLLSGIAVFG AASLVGSLAD SPTAVIAARA VLGLGAAAIL
PLSMAILPRV FSKDEQPRAI AVWTAATALG MPVGPVVGGW LLNHFWWGSV FLFNVPVAVV
ALAAGLWLLP RDAERTSAAP PFDTLGALLG GLGITALVYG TILISEDGWT APSVLASLSA
AAALLAGFVV RERRFPHPLV DFALFGDRRF RWGTLIAVFV NFAVMGILFV VPQYLQSVLG
NDAFGTGIRV LPLIGGLMLS AALSEFLLPR LGVRLVVTTG LLVLAAGVLF GATTGAADGY
GFAAGWLGLT GLGFGLAVVP ATSLVLGTLP DHGTGSGTSL LETIQQLGSA LGVAGLGSLL
SYGYLARLHT GRLPTSEADA ARDSVSDADA LAGQLHDAGL AVNAHASFVH GMSLVLLVCG
VIALLGAGLA AAFLPRHAGA PGAGQVSGTV AEPAESIA
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