Gene Caci_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3895 
Symbol 
ID8335248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4418958 
End bp4419572 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID644957021 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114624 
Protein GI256393060 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.467976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.029552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AGCCGATGGG GCTGCGCGAA CGCAAGAAGC ATGAGGCACG GCTCCGCATC 
GCGGACGCGG CGCTGGAGCT GTTCGCGGCC AAGGGGTTCG ACCATACGAC GGTCGCGGAG
GTCGCCGCCG CCGCGGACGT GTCGGTCAAG ACCGTGTTCA ACTACTTCCC TGCCAAGGAA
GATCTCTTCT TCGACCGCGC CGAGGAGGTG GAGCAGCGCT GGCTGGACGC CGTCGCCGAC
CGGTCGCCCG GCGAGTCCGT CCTCGCCGGT CTGCGTCGCA GGTCCCTGAG TCGCTTCGAT
CAGAACGCGG ACGGCTCGGC GTTCCGTTTC CGCCGAGTGA TGGCCGGTAG CGCGGTCCTG
CAAGGCCGCG GCCAGCAGAT GTGGGCCGCC CACGAGGACG CCATCGCCGC GGCTTTGGCC
GAGGCGATGG GTGCCGCCGT AGACGATCCG ACGCCCCAGG TCTTGGCGAG CCAGGCCCTC
GGCACCCATC CGCTGGCCTT GCGCATGGCC GAGCGGTGGA GCGACGCCGG GCTCGCGGCC
GAGGAGGTCC AGCGTCGGGT ACTGGACCTG ATCAACCGGT GGTACGACGT GCTGGAGGAG
GGGATCGGCC GCTAG
 
Protein sequence
MTTEPMGLRE RKKHEARLRI ADAALELFAA KGFDHTTVAE VAAAADVSVK TVFNYFPAKE 
DLFFDRAEEV EQRWLDAVAD RSPGESVLAG LRRRSLSRFD QNADGSAFRF RRVMAGSAVL
QGRGQQMWAA HEDAIAAALA EAMGAAVDDP TPQVLASQAL GTHPLALRMA ERWSDAGLAA
EEVQRRVLDL INRWYDVLEE GIGR