Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3884 |
Symbol | |
ID | 8335237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4399376 |
End bp | 4400575 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644957010 |
Product | hypothetical protein |
Protein accession | YP_003114613 |
Protein GI | 256393049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00861277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0141453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGGAA CCGGAGTAAG GGACAAACAC CCGGCGCTTT TCGACCGGGT CTGCCGCGGC TTCGCGAAGC TGGATCGGCC CGATCTCGTC GTCGAGTCCT GCTTCTGGGG CGAAAAGCAC GGTGCGAAGC TCGCCCTTGG CGGCGCATCC ATCCCCGCCT ATCTGAGCGC CGCACCCGAC TACTCCGCCA TAGACGACCC CGATGAAGAA CTGGTCGGCT TCTGGGAGAT CCTCCAGGAG GATCCCTTCG CCCAGCTCCA GCTTATGGCC GAGTTCGAGC AGCCGGGTCC TGACGACGAG GTGCTGCCGC CCAGCTTCCA CACACCCGGG GCAGACGTTC TGTCCCGTCT CACCGCGCTG AGTCCCGCCG GGGAACTCGC CGATCTGCTT GCCGAGACGG GCCTGGCCCC GTACCTGGAG CCAGCCATGC GGCGGCTCCG CGCCGCGCCT GAGCTCGGCA AGGCCGCCGT GGCGCGCGCT GAAGCGCCGG GAGACTTGGC CGAGGCGGTG GCCTGCGCGT TGCTGGCGTT GTTACTTACC GTCGCTGATG AATCCGCGCC GACGGGCGCT CAGCTGGACC GACTGGCGGA CTTGCTGGTC GCCGCGCTGG GCGCCGGGGA GCGATCCGGG CGGGTGTCGA AGACGGCACA GTTCCTCGGC AGGCGTGCCT TGAACGTGAC GACGCAGCCG TTGCTGCGCG TCTTCCGGAA CGGGCTGACC GAGGCAGCGG TCCCGATGCT CGGCGACATC CTGAACTACC AGGCCCACGG TGACGGTTTG CGCGACTTCC TCAGAGCACG GATATTCGCC AGCGACGAGC ATACGATCGT CCTGGGCCAC AGCCTCGGCG GAGTGGCCCT GGTCGACCTG CTTGCCGCCG CCACGCCAGG GGAATTCGGC CAGGTCCGGC TGCTGGTGAC GGTGGGGTCG CAGGCTCCGT TCTTGTATGA GTTGGGCGCG TTGCACAGTC TGCCGCTCGA CAGCGCCGAC ACGGCGGATG CGTTGGCTCG TATGCCCAAG TGGCTCAACG TCTACGATCG CCGCGACCTG TTGTCCTATC TGGCTGCGCC GGTGTTCGGC CCGGAGGGCG TCGAGGACTT CGAGGTCGAC TGCCGGCAGC CGTTCCCCGC GGCTCACAGC GCGTATTGGA ACCTGGACCG CGTCTATGAA CGGATTTGCC AGGAGATCGC ATGGACTTAG
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Protein sequence | MHGTGVRDKH PALFDRVCRG FAKLDRPDLV VESCFWGEKH GAKLALGGAS IPAYLSAAPD YSAIDDPDEE LVGFWEILQE DPFAQLQLMA EFEQPGPDDE VLPPSFHTPG ADVLSRLTAL SPAGELADLL AETGLAPYLE PAMRRLRAAP ELGKAAVARA EAPGDLAEAV ACALLALLLT VADESAPTGA QLDRLADLLV AALGAGERSG RVSKTAQFLG RRALNVTTQP LLRVFRNGLT EAAVPMLGDI LNYQAHGDGL RDFLRARIFA SDEHTIVLGH SLGGVALVDL LAAATPGEFG QVRLLVTVGS QAPFLYELGA LHSLPLDSAD TADALARMPK WLNVYDRRDL LSYLAAPVFG PEGVEDFEVD CRQPFPAAHS AYWNLDRVYE RICQEIAWT
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