| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3883 |
|---|
| Symbol | |
|---|
| ID | 8335236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4397319 |
|---|
| End bp | 4399385 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644957009 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003114612 |
|---|
| Protein GI | 256393048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0235093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0301414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAG CGATTCCGAC GGCGCCCGAG GACGTACACG CCATCGTCGT CGGTATCGAG
CACTATCCGG GCCTCGGCCG TCGTTGGCGA CTGCCCGGCG CGGTCGAGGA CGCGCACCGG
ATGGCAGCGT GGCTGATCGG CCAGGGTGTC CCGTTCGACA ACATCTCACT CTTGACGAGC
CCTGATCCCG AGCGCGTCGC GGCCGCGATG CCGGCCGGGG AGCAGGGGGC GGAGGACGTC
GCCGTCCCGC CGGTCCCGGC ACGACCTGCG GACCGCGCCA CTGTCGCCGC GGTGATCCGA
AACGAACTCC CGCGCCGCGT CGGCCGTCTG CTGGTGTTCT TCTGGGCGGG CCACGGGATC
GTCGACGACC GCGACCGGCT CTGTCTGCCT TTCTCGGACA CCACCTCCAA CGATCCGAGC
TGCCTGATAC TGGAAGACAC CCTCGCCTGG CTGCGCTCCG AGGTGTTCCC GGCAGGCCGG
TTCGAGCGCC AGGTGATCAT CGTCGATGCC TGCCGTCTGT CGGCCACCGA CCGTCGGCTC
CGGCTCGCGG ACATGGAGTA CCCGCCCCAC CCGGCGCGGC GTGCCTGCTA CCAGTCCGTC
CTGTACGCCT GCCGCGTCGG CGAGGCCGCC CAGAACCAGG CCGACCGGCT CAGCGGCCAG
CTCTCCGAGG TCCTGATGGC CCAACTCGCC GATGCGAGTC TCGACTCCCT GAACGCGGCA
GTGCACACAA CGGTCACCGC TGTCCAGAAC CGTTTCGCGG AGCTGCGTGC GGCTGGCGAA
GCTTGGCAAA CCCCGGTCCG CATGCACTAT GCGGGCTGGC AGGACTCGAA TATCTGGCAC
GAGACCGCCG CAGGCGCCAC GGCGCGGCGC GATGGTCTCG ACGAGAAGGC TTGGCGGGAC
TTGGAACGTC AGCTGGCTGG CGTCACCCCG GAGCCATGGT GTGAACAGGC CTTCCGTTGG
TCGTTCGGCA CCGGCGAGAC CGCCGAGCAG GCCCCTTACG CCATGCCGGA CGGAGACCTG
TCCGCCTGGG CCCGCGACCT CGACGAGTAC GAGGGCCGCA CCGACGGTCT GCCGCAGGTT
GTCGCGTTCG TCCATGCTCT CGCTGCGGGC TTCCGCGCCC AGGAGGATCC GGCGGCGCGG
CACCGTGCGG GCGCACTGTC CGCCTGGGTC GCCAAGGTCT GCAATCGCCA CTCGTTGCCG
AAGCCACCCG AACCTCCGGT ATTCACTTCG GAGAACACCA CCCTGATGGT CCGCCTCGAT
CAGGACCCCC AGCACGAGGA CCAGGTCTTC CTCGACATCT GGCTGCGGGC CGCCGGCTGG
CAGTGCCTGG AACCCGCAGA GGGCGAGGGG CACCGCAAGC GTGTGACGCT AGACAAGGCC
CGGGACATCC TTGATGAGCA CCTGACCGGC CTGGGCGGTA CCAGCACCGC CGGGGCCTCC
AGGCCTTTCG GCCTGCGGCG GGTCGAGTTC GCGGTCGAGG CGTTCCTCCT GGAGGAGGGG
TTCGACCAGT GGTCGATGTC CGCCGGACTG CGTCGCCCTT GGAAGTTGGG GCGTCGGTTC
GAAGTGGTGG TGCGCTGTCC GGAGGCCCGC CGCAACCTCA ACCTGGCGTA TCTGTGGGGC
TGTCGCTGGG ATTGGTTCGT CGCCAACAGC GGCACCTGCG CCGAAGCCAC GGTCTGGCTG
AGCCAGGTGG ACGTCGATGA CCTGGAGAGA CTGGACGCGC TGATTGACAA GTGGTCCGCC
GGGCAGCATC CGGTATGCGT GGCTGTGGAC GCGGTCTCAC CGGGCCACGC CGACGGCTGG
GGGGCCGCGC TGGACGCTGG GATGCCGGTG ATCGTCTGGC GGCGGCCGGA CCGGGCGGAT
GACGACCGAG CACCGGCGTC ACTGCGGGAG TTGCTGCCTA TAGACGACGT ATCCCAGCTA
CCGGCCACAG TGAAGCAATT ACGGACCGAC TCGACGGTGG ACCCTCGGCT CCGCTCCACT
GTGGTGCTGC TGTGGGACGA CCCGGGGCAC GCGCTGGACC GGGAACTGCT GAGCGACGCG
GGACTGCGCT CGCCGGGGGC GCCATGA
|
|---|
| Protein sequence | MDLAIPTAPE DVHAIVVGIE HYPGLGRRWR LPGAVEDAHR MAAWLIGQGV PFDNISLLTS
PDPERVAAAM PAGEQGAEDV AVPPVPARPA DRATVAAVIR NELPRRVGRL LVFFWAGHGI
VDDRDRLCLP FSDTTSNDPS CLILEDTLAW LRSEVFPAGR FERQVIIVDA CRLSATDRRL
RLADMEYPPH PARRACYQSV LYACRVGEAA QNQADRLSGQ LSEVLMAQLA DASLDSLNAA
VHTTVTAVQN RFAELRAAGE AWQTPVRMHY AGWQDSNIWH ETAAGATARR DGLDEKAWRD
LERQLAGVTP EPWCEQAFRW SFGTGETAEQ APYAMPDGDL SAWARDLDEY EGRTDGLPQV
VAFVHALAAG FRAQEDPAAR HRAGALSAWV AKVCNRHSLP KPPEPPVFTS ENTTLMVRLD
QDPQHEDQVF LDIWLRAAGW QCLEPAEGEG HRKRVTLDKA RDILDEHLTG LGGTSTAGAS
RPFGLRRVEF AVEAFLLEEG FDQWSMSAGL RRPWKLGRRF EVVVRCPEAR RNLNLAYLWG
CRWDWFVANS GTCAEATVWL SQVDVDDLER LDALIDKWSA GQHPVCVAVD AVSPGHADGW
GAALDAGMPV IVWRRPDRAD DDRAPASLRE LLPIDDVSQL PATVKQLRTD STVDPRLRST
VVLLWDDPGH ALDRELLSDA GLRSPGAP
|
|---|
| |