| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3881 |
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| Symbol | |
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| ID | 8335234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4392573 |
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| End bp | 4396172 |
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| Gene Length | 3600 bp |
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| Protein Length | 1199 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957007 |
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| Product | hypothetical protein |
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| Protein accession | YP_003114610 |
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| Protein GI | 256393046 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0452998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGA AATTGGCGGA GCTGATCCGG GAAGGCGGCG CCCCGGATCC GCGGCCGGAG
GAACTGGCCG ACATCCTCTG GCTGGCTTCT GTCATCACGG TGAGCGACGA CCACACTAAC
GCGGGAACAG CGACCGTGCC GGCGCCTGGT TCGGATCCGG CACAGAGCCC TGACGGTGAC
AAGCAGGAAC CTGAGACACA ACCTGACGCC GACGCGGGCC GTTCGCGCGA TGGGAACGCA
GGTCTAGAGC CGCGCGCGCC GCAGCCGACC GGCGACGTCT CAAGCTCCGG CCCCGGCCAC
ACTGTCCGCG GCGGCCTACA CAGTCCGGCC CGTATCGGCA GCCCCGGGAC GCAGGCTGCG
GCGCTCGTCC GCGGCCCCGG CGAGCCGGGG CTGACCAATA CGCTCGACCT GATGCGGGCG
CTGCGCGCCC TAAACCGCCA CGTCCCCTCC GACACCGAAT TCGAGCTCGA CGAGGACGCC
ACTGTGGCCC GACGTCTGGA CGAGCGCATG CTGCTCCCGG CGCTGCGGCC CCGGCCTTCC
CGCTGGCTGC GCCTGGCGTT CGTCCAGGCC GACAGCCCGT CGATGGCCCT ATGGCGGTCG
GAGATCCACG AGCTGCATCA GGTGATGGTC CGCCTCGGGG CGTTCCGGGA CGTTCGCCGC
TGGAGATTTA CCGAACGCCC CGACAGCGAT GGAACCACGG TGGAGGTGCG CCGACACACC
GCTACAGCAG CCCAGGGCCT TGCGCTCCGG TCCCGCGACA TCGTCGACCC CACCGGCCGC
CAGCTCATCT TGGTCCTGAC GGACACCGTC GGACCGATGT GGCACACCGG GGCCGCCCAA
CGTCTGCTGG CCGAATGGGC CCGCACCTCC CCGGTCGCGA TCCTGCATTT GCTGCCCTCG
GGTCTTTGGT CCAGGGGCGG CGCCACACCG CTTCCCGCGA TGATCCAGGC CCCGAGGCCC
GGCGCCCCGA ATGCACGGTG GCAGACGTTC ACCGGACCGT CGCGGCGGCG TTCGGCGCGT
CCCGGCCGTA CCGTGATCCC CGTCCTGACG CTCGAGGCCG AAGATCTGCG GCCCTGGGCT
GGGCTGACCG CGGGGAACGG CCGGTGGGCG CGGACGGCGG CCCTGGTGAT TGAAGCAGAC
CGCCCCCGAC CCGCCGGTGA GCAGCGCCGG GCCATCGCAA CGGTGGAGCT GGACCGAGAA
CCCGATCCCG TCGCCACGGA TCCGGATCCC CAAGAGCTAA TCCGCCGTTT CCGCTTCTCC
TCCTCCGGCT CGGCCTGGCG CCTGGCCGGC CTGCTCTCGG CCGTCGAACC GGTCACCCTC
CCCATCGCCC GCCTCGTCCA GCGGGCCATG GTTCCTGGCT CCTCCCGCGG GGACCTCGCC
GAGGTGTTCC TCGGCAACCT GCTGCACCGC GAGGCTCCCG CGTCGTCCGA GGAAGCAGAA
TCCGCGGACC AGGCCGTGTT CGACTTTGTC CCCGGCGTGC GCGAGGCCAT ACTCACCGGC
CAGTACCGCC GCGACACCCG CCAGGTCCGA GACCTCGTCC ACGACGAGGT CTCCGCCTAC
CTGGAACGCC GCCGCGACCG GCTCGGCGGC GACCGGACCG CCCTCACCGG TGTCTCGGGG
ACAGGCCCGG CGCTCGCTGA AGGACTGCCG TTCGCGAGCC TGTCGGCCGC CGGTATGAGG
CGGCTGGGAG AGCGGCCCGA GGAGGTCAGG TACGGGGTCG GGCAGTGGCT GCCAGACGGG
CCCCGGCCCA GCGTCGACGA CGCGTTGGCG ATGGTCGCGG CGGCTCGCGC CGCCGCGACC
GCGGAGCCGC CCGGCGGCCG GCGGTACGGC GAGCTGATGT CGGCGCTGGG CGCGGCCCTT
GTGCTGCTGG CCGATCAGAC CGGCGACATC GTCGACCTGG TCGACGGCAT CGAGGCGTAC
ATGGACTGCG TCCCGAGTGG AGCCTCCACC GACCGGCAGC CTTGGACCTG GCACTTCGCC
CTCGGCGACG CCCTGCTCAG GCTCGCCCGC CGGTCCGGCG ACCTCGGCGC GATGATGGAC
GCCGCCGCCG CGTTCCGGCA CGCCGTGCTG GCCAACCCGC CCGAACCTTC GATGCGCCGG
GAGATTCTCT GGACCCTGAA CCTCACAGAA AGCCTGCTCT CCGGTGACGA GCCCGACGAC
GCCGTCTCGG CAGCCCGCCG TGCGCTCAAG GACATCCCGT TCGACGACCC CACCGCGGCG
GAACGAATGT ATGACCTCGG ATCAGCGCTC GCCGAAGCGT CACCCCCGGA CCGGGACAGC
GCCTCTTTCT ATTTGCACGC TGTCATTTCC GATGACAACG TGCCGCGTGT AGTGCGGAGC
AACGCCTGCC GGCGGCTGGC CCCCCTGGTG GGCCCTCCCG CACACGCGTT GTCACTCATC
GAGGACGCGA TCGACTTGCT CCGGCTGCCG TCTCCGCCAC CCCGCGGTGC TTTGCCGGTC
GCGCGGCTGG TCGGCGAGGC TGTGGCGTCG GCCCTCGACG CGGGACGTCC GGAGCGTGCC
GTGGAGTTGC TGGAGATGCT TCGGGGCTCG GTGCTGCCGA ATCCGCCACA GCAGGCTACT
GATTTCGGAG ACCTTGTAAG GCGCGTCAAC AAGGCGGGCT TGGGCCCCAT TGTGTTGGTG
AACACTGCGC CAACGCGCTG TGACGCGCTG ATCATCGGGG GCGGGTCGAG CTCGGTAACG
GTCGTGCCGT TGCCCGGGCT CAGCGAGGAG AGGGTGTGTG CGGAGGCCGC GTCGCTGGCT
GATGCGTACG CACGGGCGTT CTCGGCCGGT GAACGATCCG ACGTCCGGCG GCACGTGGCG
TTCGCCGTGT CGGACATCTT GTACTGGCTG TGGGACACCC TCGCCGAGCC CGTGCTCGCT
TCGCTGGGAC TGCAACCTAC GGCGCCAGAC ACGCAGAGTC CGCTGATCTG GTGGAGCACG
TTCGGTCCCT TGGCCCGCCT GCCGATCCAC GCGGCTTCTG AGTTTCGGCG GACGCCCGGC
GTCTCTGGAG TAATGGACCG CGTGGTGTCC TCCTACGCGC CGACGATCCG CGGCCTCTTG
GAAGCTGTCG AGCGTCCTCC TGCAGGGCTT CTCTCAGGCA TGCGTGTCTT TCCTGAACCC
AGCAAGCCAC ACGCCCCCGT TGATGTCCGC GACCTCGGAC ATTGCGCGGT CGCTGTGTTT
CCTCACGGCT CTCACTCGGA CCTTCTCAAT CCCATGCTCA GCCAGGTCGT GACACTTGGA
CACGGAGTCA AAGCGCTGAC CATCAGCGAG ATCGCCGACG AGCGTGTGAG CGCGGGGCTG
GCGTTGCTCG TCGGCATAGA CTCGCCCCCG ACGCCGCGTG TGCGTGTCGA GGAGACCGTC
CCGGTTACCG GTGCTCTTCA TCTGGCCGGG TTCCGGCAGG CGATCGGTAC GCTGTGGCCG
AAGCTCGGTT CACATGCGTT TGCACTCACA AACATGACGG CGAGTCGGTC CGACTCGCCG
AGTACCGGTC CGAAGATCGG CGAGTGGGCC CGAACTCTGC ACGGGGCCGT CGATGAGATG
CGGCACGACT TCCCGGACGA CCCGCTGAGC TGGGCCGCGT ACACCCATAC AGGAGTGTGA
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| Protein sequence | MIPKLAELIR EGGAPDPRPE ELADILWLAS VITVSDDHTN AGTATVPAPG SDPAQSPDGD
KQEPETQPDA DAGRSRDGNA GLEPRAPQPT GDVSSSGPGH TVRGGLHSPA RIGSPGTQAA
ALVRGPGEPG LTNTLDLMRA LRALNRHVPS DTEFELDEDA TVARRLDERM LLPALRPRPS
RWLRLAFVQA DSPSMALWRS EIHELHQVMV RLGAFRDVRR WRFTERPDSD GTTVEVRRHT
ATAAQGLALR SRDIVDPTGR QLILVLTDTV GPMWHTGAAQ RLLAEWARTS PVAILHLLPS
GLWSRGGATP LPAMIQAPRP GAPNARWQTF TGPSRRRSAR PGRTVIPVLT LEAEDLRPWA
GLTAGNGRWA RTAALVIEAD RPRPAGEQRR AIATVELDRE PDPVATDPDP QELIRRFRFS
SSGSAWRLAG LLSAVEPVTL PIARLVQRAM VPGSSRGDLA EVFLGNLLHR EAPASSEEAE
SADQAVFDFV PGVREAILTG QYRRDTRQVR DLVHDEVSAY LERRRDRLGG DRTALTGVSG
TGPALAEGLP FASLSAAGMR RLGERPEEVR YGVGQWLPDG PRPSVDDALA MVAAARAAAT
AEPPGGRRYG ELMSALGAAL VLLADQTGDI VDLVDGIEAY MDCVPSGAST DRQPWTWHFA
LGDALLRLAR RSGDLGAMMD AAAAFRHAVL ANPPEPSMRR EILWTLNLTE SLLSGDEPDD
AVSAARRALK DIPFDDPTAA ERMYDLGSAL AEASPPDRDS ASFYLHAVIS DDNVPRVVRS
NACRRLAPLV GPPAHALSLI EDAIDLLRLP SPPPRGALPV ARLVGEAVAS ALDAGRPERA
VELLEMLRGS VLPNPPQQAT DFGDLVRRVN KAGLGPIVLV NTAPTRCDAL IIGGGSSSVT
VVPLPGLSEE RVCAEAASLA DAYARAFSAG ERSDVRRHVA FAVSDILYWL WDTLAEPVLA
SLGLQPTAPD TQSPLIWWST FGPLARLPIH AASEFRRTPG VSGVMDRVVS SYAPTIRGLL
EAVERPPAGL LSGMRVFPEP SKPHAPVDVR DLGHCAVAVF PHGSHSDLLN PMLSQVVTLG
HGVKALTISE IADERVSAGL ALLVGIDSPP TPRVRVEETV PVTGALHLAG FRQAIGTLWP
KLGSHAFALT NMTASRSDSP STGPKIGEWA RTLHGAVDEM RHDFPDDPLS WAAYTHTGV
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