Gene Caci_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3863 
Symbol 
ID8335216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4373973 
End bp4374704 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID644956995 
Producthypothetical protein 
Protein accessionYP_003114598 
Protein GI256393034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0634319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0303395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCACG ACGGCAGTTT GAGCTTCGCG CTCCCGGTCT TCGAGCAGCA CTTCGGCGCA 
CCGGCGATCT CATCCGGCAC CTTCGAGATC GAAGCCGCTG CCAGCCGCGA CTCCTTCCCC
TCCTGGCGCT ACTCAATCGC ATCCGCGGTC GCCACCTGCC CGGATTCGGC TGAGCGGGAG
CAGCCGCTGT GCCGAGTAGC CTGCACCAAT CCGGCAGCGC TGTCCTGGAT CCTCGACGAG
ATCGAGCCGG AGGCCACCTG CCGGAACGCC AACGCTGGCT CTCACGAAGC CCCGTCGAAC
CTGGATCGAA ACGCCGGAGG ACCCGGCACG AGCAGCGACA CTCAGGCCGA CTCGGCGATT
GCCGCCGGGC TGTGGCTGCG CGAAGCGCTC CAGGCGCTGC TCGACGGCTA CGGCTCTTTG
GCCACGCCGC TGGCACACCA TAGCGAGGAC CGCCTCGTGC AATGGGGCAC GCACCTCGCC
TCCGGATACA TGACTCTGCC AGAGCACTGG GGCCAGACCA TCCCCGCGAT GGTCTCGCTA
CCGGACTTCA CCCACCTGCG CGACCTTCGC CCCGGCGGGT GGCGTGCCTC GCAGATGTTC
ACCGAACCCT GCGGCGACTA CGGCCGATGG CACTGGGACC GCAACCGTAT CCTGAAGACC
CTCACCGAGG TGATCCAACG CCAGGCCCTG CCCACCTCGG CCGGCACCCG CATCAACCAC
GAGCGCCTGT GA
 
Protein sequence
MEHDGSLSFA LPVFEQHFGA PAISSGTFEI EAAASRDSFP SWRYSIASAV ATCPDSAERE 
QPLCRVACTN PAALSWILDE IEPEATCRNA NAGSHEAPSN LDRNAGGPGT SSDTQADSAI
AAGLWLREAL QALLDGYGSL ATPLAHHSED RLVQWGTHLA SGYMTLPEHW GQTIPAMVSL
PDFTHLRDLR PGGWRASQMF TEPCGDYGRW HWDRNRILKT LTEVIQRQAL PTSAGTRINH
ERL