| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3829 |
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| Symbol | |
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| ID | 8335182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4332034 |
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| End bp | 4333992 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956966 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003114569 |
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| Protein GI | 256393005 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0243668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0465096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC TGCTCAAGAG CGATCTGTGC GGCTGGACCG ACGACCGGAT GCTCATCCTG
CACGACGAGA AGAACAAACA TGATCTGCTC GCCCGTATCA CCGACGTCCT GCAAGCCAGA
ATGGAGCAGA TCACCGATAC TGTGCTGTTC TACTACGTCG GCCACGGCCT GCTGATCGAC
GGAGGCGAAA AGCTCGGGCT GGCCATGAGC GACACGAAAG ACGATCCCCT GCGCAAAAAG
CAGAGCTCTT TACTCCTCAA CGAAGTGCGT GAGCAGCTGA GACATCTGAC GAACGCGACG
CAGGTGGAGA TACTGGACTG CTGCTACGCC GGAACCGCCT CGAACACGCA GGGCGCCGCC
AACGCATTGC AGGACAAGGT ATCGCGCGCG GTGCAAGACA AAGTATCGCG CGCAACGCAG
GAATATCGTG GCAGCCGCTA CACGGTGACC GCCTCACGGC GCAACGAGGA AGCCCTCTAC
CAGCTCGAAG ATGGCGGGCT GACCTACTTC ACCGGCTACC TCGCCGAGAT CGTCACCCAC
GGCATCGAAG GCGCGCCGGC CCACCTCGCA GCGATGCGCA TCTTCCCCGA GCTGCAGAAA
CGCTTCCGAA GGCTCGCGCT CGCCCCGATC GGCCAGCCGG TTCCGATGCC GACCCAGTTG
GTCGTCAACG AGGGCGGAGA GTTCCCGTTC GCCCGCAACG CCGCCTATCA GGAGCACTCT
CAGGAGTCGC ACCCGCCTGT CGTCGCCGAC CTCGACCCGG AGCATCGCCG CCTGCCCAGC
CGTCGCGCCA TGCTGGCTGC GGGGGTGGCG GCAGCGACCG GCTTGGGAAT CGTCGCGGCG
CTGTGGCCGG ACTCGGGTCC GGGAGGGAGT CAGGAGAAGA TCGGTAGCCC GGTGTCACCC
GGCGCAGATA GATCTTCGCT CCCCCCGACC CCAACGATTC CGACGACACC GACACCGACA
CCAACCCCGA CGATCCCCAC GACCACGCCA ACACAGGTCA CCGACGCCAC CGCACTGGGC
GCACCCCTCA AGGGCTTCGA AGCCACTGTC GAGGCGGTGG CGTTCGCCTC GAGCGGAACG
CTTCTGGCGG GCGGCAGCTA CGACCACACG ATCCACCTGT GGGACGTCGC CAACCCCGCC
ACGCCCCTTC AAGTCGGCCC GTATCTGACC GGCGACACGG ACAGCGTCAA CGCCGTGGCG
TTCAGCCCGG ACGGCCGGAC CCTCGTCGGC GCGAGCTGGG ACAAGACGAT CCGGCTGTGG
AACGTGGCAA GCCCGCTCCA CGCCGTGGCG ATCGGCCGGC CGGTCATCGG CACCGACAAG
GTCAACACCG TCGCGTTCAG TCCGAACGGA AAGACATTGG CCAGCGGCGG CGATGACAGG
ACAGTGCGGA TGTGGAACAT TGCGGACCCG CCCGCCCTCG CACCCGCGTG CCCACCTCTG
ACCGACCACA CGAACGCCGT CAACGCCGTG GCGTTCAGCC CGGACGGAAC CATCCTGGCC
AGCGCCGGCT GGGACTTCAC GATCCGGCTG TGGGAGGTCA GCGACCCGGC CCGGACTCGC
GCCGCCGGCC GACCCCTCAG CGGCCACACC TACTCGGTCG CCGCAGTGGC GTTCAGCCCG
GACGGAAAGA CCCTGGCCAG CGCCGGCTGG GACAACACCG TCCGGCTCTG GGACGTGAGC
AACCCGGCCC AGGCCACTGA GATCGGCCTT CCGCTGACCG GCCATACCGA CCACGTGCAG
GGGATCGCCT ACAGCCCCGA CGGCCGGACG GTGGCCAGCG GCAGCTGGGA CAAGACGATC
CGCCTGTGGG ACGTCAGCGA CCCGACCCGG GCCAAGCCCA TCGGCTCACC GCTCATCGGC
CACACCGGCC AAGTCGCCTC GGTGGCGTTC CACCCGATGG GGAAGATCCT GGCCAGCGGC
AGCACCGACT CGACCATCCG GCTGTGGCAG ATCGAGTGA
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| Protein sequence | MEQLLKSDLC GWTDDRMLIL HDEKNKHDLL ARITDVLQAR MEQITDTVLF YYVGHGLLID
GGEKLGLAMS DTKDDPLRKK QSSLLLNEVR EQLRHLTNAT QVEILDCCYA GTASNTQGAA
NALQDKVSRA VQDKVSRATQ EYRGSRYTVT ASRRNEEALY QLEDGGLTYF TGYLAEIVTH
GIEGAPAHLA AMRIFPELQK RFRRLALAPI GQPVPMPTQL VVNEGGEFPF ARNAAYQEHS
QESHPPVVAD LDPEHRRLPS RRAMLAAGVA AATGLGIVAA LWPDSGPGGS QEKIGSPVSP
GADRSSLPPT PTIPTTPTPT PTPTIPTTTP TQVTDATALG APLKGFEATV EAVAFASSGT
LLAGGSYDHT IHLWDVANPA TPLQVGPYLT GDTDSVNAVA FSPDGRTLVG ASWDKTIRLW
NVASPLHAVA IGRPVIGTDK VNTVAFSPNG KTLASGGDDR TVRMWNIADP PALAPACPPL
TDHTNAVNAV AFSPDGTILA SAGWDFTIRL WEVSDPARTR AAGRPLSGHT YSVAAVAFSP
DGKTLASAGW DNTVRLWDVS NPAQATEIGL PLTGHTDHVQ GIAYSPDGRT VASGSWDKTI
RLWDVSDPTR AKPIGSPLIG HTGQVASVAF HPMGKILASG STDSTIRLWQ IE
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