| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3822 |
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| Symbol | |
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| ID | 8335175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4323531 |
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| End bp | 4325087 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956961 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003114564 |
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| Protein GI | 256393000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.112071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGATC CCATCATCGT CCCGGAGCGG TCCGCCGGCC GGCTGAGCCA GGCCTGGCGG
CAGTGCGTCG GCACGGGTCG GTTCGAGCTG GCGCTGCGCC GCGACTACCA GGACTCGCTG
GCGCTCATCC AGCGGGAGGT CGGCTTCCGG CACATCCGGG GCCATGGCCT GTTCAGCGAC
GGCGTCGGCG TGTACCAGCC GTACCGGTAT CAGGGCTCCG ATCACGTCCG CTACGCGTTC
GGGTACGTGG ACCAGGTCAT CGACGCCTAC CTCGACCTCG GGATCCAGCC CTTCCTGGAA
CTCGGGTTCA TGCCCTCGGC GCTGGCCTCG GGCGACCAGA CGGTGTTCTG GTGGAAGGGC
AACGTCACTC CCGCGCGGTC CTGGAGCGCG TGGGCGGACC TGGTGCGGGC CACCCTGAGG
CACCTCGTCG ACCGGTACGG CCTCGACGTG GTGCGCCAGT GGCCGATCGA GGTCTGGAAC
GAGCCGAACC TGAAGGACTT CTGGCAGGGA GCGGACCGGG AGGCGTACCA CCGGCTGTAC
GAGGTGACGG CGCGGGCGGT GAAAGAGGTG GACGCCGCCC TGCAAGTGGG CGGTCCGGCC
ATCTCTCCCG GCGCGGACGA GTGGCTGGCG CCGTTCGCGG AGTTCGTCAC GGCACGCTCG
GTGCCCGTGG ACTTCGTCAG CCGGCACGCC TACACCTCGG GTCCGGCCCA GCACGTCCCC
TTCGGCGTGC ACCAGAGGCT GCTTCCGGCG CGGCATCTGC TCGAACAGTT CGCCGCGCCG
CGCGAGCACC TGCGCGGCAC GGCGCTGGCC GGGCTGCCGG TACACATCAC CGAGTTCAAC
TCCTCCTACC GGCCCGACAA TCCCGTGCAC GACACCGCGT TCCACGCCGC TTACCTCGCC
CCGGTGCTGG CCGAGGGCGG CGACCACGTG GATTCCTTCT CCTACTGGAC GTTCAGCGAC
ATGTTCGAGG AGGCGGGGGT TCCGACCTCG CTGTTCCACG GCGGATTCGG GCTCCTGACC
CACCGCCAGA TCAAGAAGCC CGCCTTCCAT CTGTACGCGT TCATGGCGCG CATGGGCGAA
GAAGTGCTGG CGCGCGGCGA GGACCATCTG GTCTGCCGCC GCCCGGACGG CACCGTGACG
GTGCTGGCCT GGGCTCCGGT GGAGGTCGCC GGCCGCGAGC CGGCGGCGGC CGGACATCGG
CTGCGCTTGT CGGTCCCGAT CGGGACGGCG GCGCGCTCGG CCTTCGCTTT GCGCTCCTCG
GTCAGCGAGG ACGCGGGCAA CGCGTGGGCG GCGTGGAGCG AACTCGGGCG GCCCGCGTCG
CCGACCGAGC GGCAACTCAG TGTTCTCCGT GAGACCGCCG AACCGTCGCG ACGGCACGAA
GCCCTCCCCG TCGCGGGCAG CCGCGTCGAC CTCGACCTGG TGCTGGACCG CCATGAGGTG
ACGCTGATCG AGATCAGTGC CGTGCACGAC CAGACGCCAC CGTGGTGGGA CGAGCGGCGG
CTGGTCGGGT TGCCCGGCGA CAGCGACAGC AACTACGAGA CGGAGGACGC CCGATGA
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| Protein sequence | MPDPIIVPER SAGRLSQAWR QCVGTGRFEL ALRRDYQDSL ALIQREVGFR HIRGHGLFSD
GVGVYQPYRY QGSDHVRYAF GYVDQVIDAY LDLGIQPFLE LGFMPSALAS GDQTVFWWKG
NVTPARSWSA WADLVRATLR HLVDRYGLDV VRQWPIEVWN EPNLKDFWQG ADREAYHRLY
EVTARAVKEV DAALQVGGPA ISPGADEWLA PFAEFVTARS VPVDFVSRHA YTSGPAQHVP
FGVHQRLLPA RHLLEQFAAP REHLRGTALA GLPVHITEFN SSYRPDNPVH DTAFHAAYLA
PVLAEGGDHV DSFSYWTFSD MFEEAGVPTS LFHGGFGLLT HRQIKKPAFH LYAFMARMGE
EVLARGEDHL VCRRPDGTVT VLAWAPVEVA GREPAAAGHR LRLSVPIGTA ARSAFALRSS
VSEDAGNAWA AWSELGRPAS PTERQLSVLR ETAEPSRRHE ALPVAGSRVD LDLVLDRHEV
TLIEISAVHD QTPPWWDERR LVGLPGDSDS NYETEDAR
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