| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3810 |
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| Symbol | |
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| ID | 8335163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4310833 |
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| End bp | 4311843 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956949 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003114552 |
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| Protein GI | 256392988 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.171378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.507963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTC CCGAGGCCCT GCTCGTGATG CGGCCCGACA CCTACCGGCT CCAGTTCGGC
GCCGAGGAGC TGCGCCGCCT GCGCGCGCTC GCCGAGCTCG GCGACCCGGT CTGGACGGAC
GACCTCGACA CGCCGCGCGT CCGCGCCCGC CTCGCCGAGA CGGAGGTGCT GCTCACGTCC
TGGGGCTGCC CGGTCCTGAC CGAAGAGCGG CTGGACGCGG CGCCGAAGCT GCGGGCCGTC
TTCCACTGCG CCGGCAGCGT CCGGCCGATC GTCTCCGACG CCGTGTGGCG GCGTGACGTC
CTGGTGACGA GCGCCGCCGA GGCGAACGCG ACGCCGGTGG CCGAGTACAC CCTGGCCGCG
ATCATCTTCG CCGGGAAGCA GGCACACGTC CTGGCGGCCC AGTCCCGGCT CAAGCCCGTC
GACTGGTACG CCGTCGGCGA CCGCGAGGAC CTGTCCAACT ATGGGCGCAC GATCGGGATC
GTCGGCTTCT CGCGGATCGG CCGCCGGGTC CTCGAGCGGT TGCGGGCGCT CGACACCGCC
GCCGTGCTCG TCGCCGATCC GTACGCCGAC TCGGAGGCCG TGGCCGCGGC GGGCGGACAG
CTGGTCGAGC TCGACGAGGT GCTGAAGCGC TCGGAGATCC TGTCGCTCCA CCTGCCGGAG
CTGCCCCAGA CCCGGGGGTC GATCGGCGCG CGCGAGCTGG CCCTGCTGCC GGACGGCGCG
ACTGTCGTGA ACACGGCGCG CGGCTCGGTC ATCGACACCG CCGCGCTGGA GCGCGAGTGC
GCGTCGGGCC GGCTGAACGC GATCCTCGAC GTCACCGACC CCGAGCCGCT GCCGGCCGAT
TCGCTGCTGC CGAGCCTGCC GAACGTGATG ATCACACCGC ATATCGCCGG CTCGCTGGGG
ACGGAGACCC GGCGGATGAG CGCGCAGGCC CTGAGCGAAC TGGAGCGGTT CGTCCGCGGC
GAAGCACCGT TGGACGCGGT CACGCGCGAA GTGCTGGCGG TGAGCGCATG A
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| Protein sequence | MHRPEALLVM RPDTYRLQFG AEELRRLRAL AELGDPVWTD DLDTPRVRAR LAETEVLLTS
WGCPVLTEER LDAAPKLRAV FHCAGSVRPI VSDAVWRRDV LVTSAAEANA TPVAEYTLAA
IIFAGKQAHV LAAQSRLKPV DWYAVGDRED LSNYGRTIGI VGFSRIGRRV LERLRALDTA
AVLVADPYAD SEAVAAAGGQ LVELDEVLKR SEILSLHLPE LPQTRGSIGA RELALLPDGA
TVVNTARGSV IDTAALEREC ASGRLNAILD VTDPEPLPAD SLLPSLPNVM ITPHIAGSLG
TETRRMSAQA LSELERFVRG EAPLDAVTRE VLAVSA
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