Gene Caci_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3799 
Symbol 
ID8335152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4297313 
End bp4298083 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID644956939 
ProductABC transporter related 
Protein accessionYP_003114542 
Protein GI256392978 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.43106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGA CACCGTTGGT CCGCATCAGA GGCCTGAAGA AGAGCTTCGG CGCGCACCGC 
GTCCTGGACG GGATCGACCT CGACGTCCGC GAGGGCGAGG TGACCGTGCT GCTCGGGCCC
TCCGGCTCCG GCAAGTCGAC CCTGCTGCGG TGCGTCAACC ACCTGGAGCG GCCGGACGCG
GGCTTCGTCG AGATCGGCGG CGACATCATC GGCTACCGCC ACGACGGCGG CGGCAAGCTG
CACGAACTGC ACGGCAAAAC CGTCACCCGG CAGCGAGCAC AGGTCGGCAT GGTCTTCCAG
CAGTTCAACC TGTTCCCGCA CCTGACCGTC CTGGAGAACC TCATCGAGGC TCCGGTCTCC
GTGCGGGGAC TCGCCAAGGC CGACGCCGTG AACCGGGCTG TCGACCTCCT GGCCCGGGTA
GGCCTGGCCG GCCGCGAGGG CTCCTACCCG CGCCACCTGT CCGGCGGCCA GCAGCAGCGA
GTGGCGATCG CCCGGGCACT GGCGATGGAA CCACGAGTCC TGCTATTCGA CGAGCCGACC
TCAGCCCTGG ACCCGGAACT CGTCGGCGAG GTCCTCGCCG TCATCCGAGA CCTCGCGCAC
AGCGGCATGA CAATGATCGT CGTCACCCAC GAAATCGGCT TCGCCCGCGA AGTCGCCGAC
ACCGCAGTTT TCCTGGACGG CGGCCGGATC GTCGAGTCCG GCGCACCCGC CGCCGTCCTT
GACCATCCCA CCCACGACCG AGCCCGGGCC TTCCTGTCCG CGGTCCTGTG A
 
Protein sequence
MTGTPLVRIR GLKKSFGAHR VLDGIDLDVR EGEVTVLLGP SGSGKSTLLR CVNHLERPDA 
GFVEIGGDII GYRHDGGGKL HELHGKTVTR QRAQVGMVFQ QFNLFPHLTV LENLIEAPVS
VRGLAKADAV NRAVDLLARV GLAGREGSYP RHLSGGQQQR VAIARALAME PRVLLFDEPT
SALDPELVGE VLAVIRDLAH SGMTMIVVTH EIGFAREVAD TAVFLDGGRI VESGAPAAVL
DHPTHDRARA FLSAVL