Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3799 |
Symbol | |
ID | 8335152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4297313 |
End bp | 4298083 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956939 |
Product | ABC transporter related |
Protein accession | YP_003114542 |
Protein GI | 256392978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.43106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGGA CACCGTTGGT CCGCATCAGA GGCCTGAAGA AGAGCTTCGG CGCGCACCGC GTCCTGGACG GGATCGACCT CGACGTCCGC GAGGGCGAGG TGACCGTGCT GCTCGGGCCC TCCGGCTCCG GCAAGTCGAC CCTGCTGCGG TGCGTCAACC ACCTGGAGCG GCCGGACGCG GGCTTCGTCG AGATCGGCGG CGACATCATC GGCTACCGCC ACGACGGCGG CGGCAAGCTG CACGAACTGC ACGGCAAAAC CGTCACCCGG CAGCGAGCAC AGGTCGGCAT GGTCTTCCAG CAGTTCAACC TGTTCCCGCA CCTGACCGTC CTGGAGAACC TCATCGAGGC TCCGGTCTCC GTGCGGGGAC TCGCCAAGGC CGACGCCGTG AACCGGGCTG TCGACCTCCT GGCCCGGGTA GGCCTGGCCG GCCGCGAGGG CTCCTACCCG CGCCACCTGT CCGGCGGCCA GCAGCAGCGA GTGGCGATCG CCCGGGCACT GGCGATGGAA CCACGAGTCC TGCTATTCGA CGAGCCGACC TCAGCCCTGG ACCCGGAACT CGTCGGCGAG GTCCTCGCCG TCATCCGAGA CCTCGCGCAC AGCGGCATGA CAATGATCGT CGTCACCCAC GAAATCGGCT TCGCCCGCGA AGTCGCCGAC ACCGCAGTTT TCCTGGACGG CGGCCGGATC GTCGAGTCCG GCGCACCCGC CGCCGTCCTT GACCATCCCA CCCACGACCG AGCCCGGGCC TTCCTGTCCG CGGTCCTGTG A
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Protein sequence | MTGTPLVRIR GLKKSFGAHR VLDGIDLDVR EGEVTVLLGP SGSGKSTLLR CVNHLERPDA GFVEIGGDII GYRHDGGGKL HELHGKTVTR QRAQVGMVFQ QFNLFPHLTV LENLIEAPVS VRGLAKADAV NRAVDLLARV GLAGREGSYP RHLSGGQQQR VAIARALAME PRVLLFDEPT SALDPELVGE VLAVIRDLAH SGMTMIVVTH EIGFAREVAD TAVFLDGGRI VESGAPAAVL DHPTHDRARA FLSAVL
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