| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3798 |
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| Symbol | |
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| ID | 8335151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4296267 |
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| End bp | 4297316 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956938 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003114541 |
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| Protein GI | 256392977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.189773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCG AAGTCTCGGC CGAGATCCCC GCGGGGATCT CAGCTCCCGC GCCATCGGCG
GCCGTCGAAC GGGACGCCGC CGCCGTATCC GGACCCGACC ACCCATCCAC CGACGAGCAG
CTTCTGTCCG CCAAGCTCGT CCCGCTGCGC CGCCCCGGTC AGTGGATCTC GGCGGCCGTC
CTGCTCGTGC TGCTGGCGAT GCTGGTCAAC ACTCTGCTGA CCAACCGGCG CTTCCAGTGG
GACGTGGTCG GCCACTATCT CTTCCAGGCC TCGATCCTGC ACGGCCTGGA GCTCACGCTC
TGGCTCACCG CCGCCGTGCT GGCCGCCGGC TACCTGATCG GGACCGGCGT CGCGGCGATG
CGGCTGTCGC CGAACCCGAT CCTGAAGTCG CTGAGCTTCG GCTTCGTGTG GCTGATCCGC
TCCCTGCCAC TGCTGGTACA GCTGCTCTTC TGGTATGAGA TCGCCTCCCT GTATCCGAGG
CTGTCGTTCG GGATCCCGTT CGGGCCGGAG TTCGCCGGCG TCAAGACCGC GCACCTGTTC
AACGGGGTCT TCGCCGCGTT CATCGCGCTG ACGCTCGACG TCGCGGCCTT CTCCTCGGAG
CTCATCCGAG GAGGCATCCT GGCGGTGCCG TCCGGACAGG TCGAGGCCGC GCAGGCGCTC
GGGCTGGGCA AGGGGCGGAT CTTCCGCAGG ATCGTGCTGC CGCAGGCGAT GCCGTCGATC
ATCCCGGCGT CCGGGAACCT GCTGATCGGG ATGCTCAAGG CGACGTCGGT GATCAGCGTC
ATCGCCGTAC AGGACCTGCT GTACTCCACG CAGCTCATCT ACAACGAGAA CTTCCAGGTC
ATCCCGCTGC TGCTGGTCGC GACGCTGTGG TACATCGCGC TCACGACGGT CCTGTCCATC
GGCCAGTACT TCGTCGAGCG GCACTACGCC CGCGGCACCG ACCGGCGCGG CGACACCGGG
TTCCCCGGGT TCCGGCAGGC GTTCACCGCG AATCTCCCGC TGTTCGGCAG AGCCGGACGG
CCGGCTCGCG CGAAGGCGGC AACGCCGTGA
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| Protein sequence | MTSEVSAEIP AGISAPAPSA AVERDAAAVS GPDHPSTDEQ LLSAKLVPLR RPGQWISAAV
LLVLLAMLVN TLLTNRRFQW DVVGHYLFQA SILHGLELTL WLTAAVLAAG YLIGTGVAAM
RLSPNPILKS LSFGFVWLIR SLPLLVQLLF WYEIASLYPR LSFGIPFGPE FAGVKTAHLF
NGVFAAFIAL TLDVAAFSSE LIRGGILAVP SGQVEAAQAL GLGKGRIFRR IVLPQAMPSI
IPASGNLLIG MLKATSVISV IAVQDLLYST QLIYNENFQV IPLLLVATLW YIALTTVLSI
GQYFVERHYA RGTDRRGDTG FPGFRQAFTA NLPLFGRAGR PARAKAATP
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