Gene Caci_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3797 
Symbol 
ID8335150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4295257 
End bp4295991 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID644956937 
ProductFR47 domain protein 
Protein accessionYP_003114540 
Protein GI256392976 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.848679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTG TGTACCTTGC CATCATGACG AAGCAAGCCC CTGATCCGTC AGATCTGTCT 
CACGTCCTGG ACGATCCCGC CCGCCACGCG CTGCTCGGAC CGCACGCGGA GTTCGCCGAA
CGCGTCGGCG ACGTGCTGCG CTATCCGCCG GAGATGTCGT TCTTCACCTC GCTGCCGCCG
CGTCCCACCG AGGCGGACTG GCGGGACGCG GCCAAGCTGC TCGGTCCCGG CGGGATCCTG
ACCGCCGCGT CGGACGCCGT ACCGGACAGG CCCGGCTGGG AGGTCGTGAT GGCGTTGCCC
GGCGTGCAGC TGGTCGACGA CGGCATCGCC GCCGCCTCCG ATCCGGAGGC GGTCCGGCTC
ACGGCCGCCG ACGTCCCGGA GATGACCGCC CTGGTCGAGC ACGCCAAGCC CGGGCCGTTC
CGGTCCCGCA CCATCGAGAT GGGCACCTAC CTGGGGATCC GCCAGGAAGG CCGGCTGGTC
GCGATGGCCG GCACGCGGCT GCACCCGCCG GGCCACGCCG AGATCAGCGC CGTGTGCACG
CACGCCGACT TCCGCGGCCG CGGGCTGGCC GCCCGGCTGG TGCTCGCCGT CGCGCACGAC
ATCCGCTCCC GCGGCGAGAT CCCGTTCCTG CACGCCGCAG CCGACAACAC CGCCGCGATC
CGCCTGTACG AGGCGCTCGG ATTCCGGCTG CGCCGCACCG TGGTCTTCGG CGGCATCCGG
GTGCCGGCCG AGTAG
 
Protein sequence
MGIVYLAIMT KQAPDPSDLS HVLDDPARHA LLGPHAEFAE RVGDVLRYPP EMSFFTSLPP 
RPTEADWRDA AKLLGPGGIL TAASDAVPDR PGWEVVMALP GVQLVDDGIA AASDPEAVRL
TAADVPEMTA LVEHAKPGPF RSRTIEMGTY LGIRQEGRLV AMAGTRLHPP GHAEISAVCT
HADFRGRGLA ARLVLAVAHD IRSRGEIPFL HAAADNTAAI RLYEALGFRL RRTVVFGGIR
VPAE