Gene Caci_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3792 
Symbol 
ID8335145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4288874 
End bp4289869 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID644956932 
Productprotein involved in cellulose biosynthesis (CelD) 
Protein accessionYP_003114535 
Protein GI256392971 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG TCGAAATCGT GGCCCGGTCC GGCACGGTCC TGCTGGAGGA TCCTTCCTGG 
GACTCTCTCG TCGATGAGGC GGGGACGCCG TTCCAGAGCC GCCGCTTCCT GCTCCCGTGG
TGGCGCGACA CGCGAATCAA GAGCCCTGGG TCGCAACTGC TCGCCGTCGA GGTCGTCGAC
GGGCTCAGAA CGGTCGGCGT CTGCGCCTTC GAACTGTCCG GCGGTCTGCT GTCGTTCGCC
GGCGGCCAGG ACGTGGTGGA CTACATGGGT CCGGTCTCGG CGGAGGGTCG GGAGAAGGAA
GTCGCGCAAG CCTTGGCGCG ATGGGTTCTC GAGGGAGCGG AGTGGAGCTC AGCGCGCCTG
GGCGGTCTGA CACCCGCCGA AGTGACAGCC CGGGAGCTGA TCGAGGCGGT CTTGTGCCGC
GTGCCCACGG CTCGGGTCGA GACCTATGAT CAGGCGCCCG GCATCGACGG AGCTCCCCAC
GGGTACCTCA CTTTGCTGAA CTCCAAGCGG CGCCTGGACG TCCTGCGCAA GCGCAACCGC
CTGGTCGAGG AAGTCGGCGA GGTGCGCCTG GAGGCCTCGA CTCCGGGAAC GCTGCCGGAA
GCGCTCGACC GGCTGCTGGT CTGGAAGTCC GCCGCCGGTA CCGCCACCGC GGATTTCGTC
GAGGAGTACG GACGGCTGTT GGCAGACCTG CTCGGGGAAT TAGCTCTGGG CGGCTCCGGA
CACGTCGTGG AGTTGTGCGC CGGCGACCGA CGGCTGGCCT CGGCCATCGT CTTGCGCCAC
CGCACGACGA CGTACCTCTA CAACATGGCA TACGACCCGG CCCTGATCTC CGATGCCGCG
GTCGGCCTGG CTCCAGGGGT CGTCCTCGTC TCATACCTGG TCGAACAAGC CCTCGATGCG
AACTGCCGGT TCGACTTCTT GAAGGGCGCC CAGGACTACA AGCGGCGCCT GGGCGGCGTG
CCCCGAGATC TGGCCGCCAT CATCGTCGAG CGCTGA
 
Protein sequence
MNDVEIVARS GTVLLEDPSW DSLVDEAGTP FQSRRFLLPW WRDTRIKSPG SQLLAVEVVD 
GLRTVGVCAF ELSGGLLSFA GGQDVVDYMG PVSAEGREKE VAQALARWVL EGAEWSSARL
GGLTPAEVTA RELIEAVLCR VPTARVETYD QAPGIDGAPH GYLTLLNSKR RLDVLRKRNR
LVEEVGEVRL EASTPGTLPE ALDRLLVWKS AAGTATADFV EEYGRLLADL LGELALGGSG
HVVELCAGDR RLASAIVLRH RTTTYLYNMA YDPALISDAA VGLAPGVVLV SYLVEQALDA
NCRFDFLKGA QDYKRRLGGV PRDLAAIIVE R