Gene Caci_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3786 
Symbol 
ID8335139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4283952 
End bp4284869 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID644956926 
ProductABC transporter related 
Protein accessionYP_003114529 
Protein GI256392965 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CATCGCTCGC GGGCGTCGGC TTCGGCTCCG ATCCCGGCTC GGGCGCGGGC 
TCGCCTTCGG CTGCGGGTCC GGGCTCGGGC TGCGAGATCC GGCTGCACGA CGTCGTCCTC
GGATACCGGC GCCGCGCCGT GCTCGGTGGC GTGGACGGTG TGGATCTAGT AGTCAGCGCC
GGTGAGATCC TTACCGTGGT CGGCCCGTCC GGCTGCGGCA AGTCGACGCT GCTGCGCGGT
CTGGCCGGAC TGCTGCCCAC CCTTCGAGGC CGGATCAGTG TGGGCGGCGT GCCGGTCACC
GGGCCCGGGT CCGACCGGGC GATGGTCTTC CAGGACGACG CGCTGCTGCC GTGGCTCGAC
GTGCGGCGCA ACATCGAGTT CCCGCTGGCC GTGCGGCAGG TGCCCAGAGC CGAACGCAAG
GCGAGAGCCG AGGAGTGGAT CACTCGGGTG GGCCTGGACG GCTTCGACAG GCATCTGCCC
GGCCGCTTGT CCGGCGGGAT GCGGCAGCGG GTGCAGTTGG CCCGCGCGCT GATCGGTGCC
CCTCCGGTGG TGTTGATGGA CGAGCCGTTC GGCGCGCTGG ACCCGGCGAC GCGGGCCGCG
ATGCGCGCGC TGCTCGTGGA CGTGTGGCGG CAGGGCGGCC CGACCGTGGT GTTCGTGACA
CACGACGTCG ACGAGGCGCT GGAGATCGGC GACCGGGTGA TCGTCCTCGG ACGTGCCGGG
ATCGACACCG TCATCCCGGT ACAGCGTCCC CGCGACGCGA CGGCTTCCCG CGAAGGCCAG
CGTGCCCGGG TTCTCACAGC CTTGATGAAC AGCGCGGGGG CGCCCGCGAT GCCCGTGGTG
GCAGCGGACG CCGAGGACCT GACGGCAGCG GCGGCGACAG CGGCAACGGC AACGAATCCG
ACAGAGGTGG CCTCGTGA
 
Protein sequence
MSTSSLAGVG FGSDPGSGAG SPSAAGPGSG CEIRLHDVVL GYRRRAVLGG VDGVDLVVSA 
GEILTVVGPS GCGKSTLLRG LAGLLPTLRG RISVGGVPVT GPGSDRAMVF QDDALLPWLD
VRRNIEFPLA VRQVPRAERK ARAEEWITRV GLDGFDRHLP GRLSGGMRQR VQLARALIGA
PPVVLMDEPF GALDPATRAA MRALLVDVWR QGGPTVVFVT HDVDEALEIG DRVIVLGRAG
IDTVIPVQRP RDATASREGQ RARVLTALMN SAGAPAMPVV AADAEDLTAA AATAATATNP
TEVAS