Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3781 |
Symbol | |
ID | 8335134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4272867 |
End bp | 4273646 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956921 |
Product | ABC transporter related |
Protein accession | YP_003114524 |
Protein GI | 256392960 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGG ACGTTGGAGG GCTGACCACC GCTCCGGCCG GGGTCGCGGT CCGCGGCCTG TACCGCAGCT TCAACCGGTC CGGCGGCGTG CTCAACGGTC TGGACCTGGA CATCGCGCCG GGGGAGTTCG TCGCGCTGAT CGGGCGCTCC GGCAGCGGCA AGACCACGTT GCTGCGCGCG CTGGCCGGGC TCGACCGGGA CGTCGAGGGC TATGGCCGCA TAACGGTTCC CGAGCAGGTG TCGGTGGTCT TCCAGGACTC CCGGCTGCTG CCGTGGAAGC GGCTGCTGGC CAATGTGACG CTCGGCCTGG AAGGCAGGGA CGCCGTCGAG CGCGGGCTGC GGGCGCTGGC GGAGGTCGGC CTCGCCGGCC GGGAGCAGGC CTGGCCGGCC GAGCTGTCCG GCGGCCAGCA GCAACGCGCC GCGCTGGCCC GCTCGCTGGT CCGCGAACCG CGGCTGCTGC TGGCCGACGA GCCTTTCGGC GCGCTCGACG CACTCACCCG CGCCCAGATG CACCGGCTGC TGCGCAAGCT GTGCCAGGCG CACCAGCCGG CGGTGCTGCT GGTGACCCAC GACGTCGATG AGGCGATCGT GCTCGCCGAC CGGGTGATCC TGCTCGACGA CGGGATCGTC GCCACCGACC TGCGGATCGA CCTGGAGCAG AGGTCTGCGG CGGACCCGGG CTTCGCCGTG CTGCGCCAGC GGTTGCTCGA CGCGCTGGGC GCCACCGGCG AGCACCTCGG CTCCGACTTC ATCGCTCCCG GCACGCGCCG GGCTTCCTGA
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Protein sequence | MATDVGGLTT APAGVAVRGL YRSFNRSGGV LNGLDLDIAP GEFVALIGRS GSGKTTLLRA LAGLDRDVEG YGRITVPEQV SVVFQDSRLL PWKRLLANVT LGLEGRDAVE RGLRALAEVG LAGREQAWPA ELSGGQQQRA ALARSLVREP RLLLADEPFG ALDALTRAQM HRLLRKLCQA HQPAVLLVTH DVDEAIVLAD RVILLDDGIV ATDLRIDLEQ RSAADPGFAV LRQRLLDALG ATGEHLGSDF IAPGTRRAS
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