Gene Caci_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3781 
Symbol 
ID8335134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4272867 
End bp4273646 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content73% 
IMG OID644956921 
ProductABC transporter related 
Protein accessionYP_003114524 
Protein GI256392960 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG ACGTTGGAGG GCTGACCACC GCTCCGGCCG GGGTCGCGGT CCGCGGCCTG 
TACCGCAGCT TCAACCGGTC CGGCGGCGTG CTCAACGGTC TGGACCTGGA CATCGCGCCG
GGGGAGTTCG TCGCGCTGAT CGGGCGCTCC GGCAGCGGCA AGACCACGTT GCTGCGCGCG
CTGGCCGGGC TCGACCGGGA CGTCGAGGGC TATGGCCGCA TAACGGTTCC CGAGCAGGTG
TCGGTGGTCT TCCAGGACTC CCGGCTGCTG CCGTGGAAGC GGCTGCTGGC CAATGTGACG
CTCGGCCTGG AAGGCAGGGA CGCCGTCGAG CGCGGGCTGC GGGCGCTGGC GGAGGTCGGC
CTCGCCGGCC GGGAGCAGGC CTGGCCGGCC GAGCTGTCCG GCGGCCAGCA GCAACGCGCC
GCGCTGGCCC GCTCGCTGGT CCGCGAACCG CGGCTGCTGC TGGCCGACGA GCCTTTCGGC
GCGCTCGACG CACTCACCCG CGCCCAGATG CACCGGCTGC TGCGCAAGCT GTGCCAGGCG
CACCAGCCGG CGGTGCTGCT GGTGACCCAC GACGTCGATG AGGCGATCGT GCTCGCCGAC
CGGGTGATCC TGCTCGACGA CGGGATCGTC GCCACCGACC TGCGGATCGA CCTGGAGCAG
AGGTCTGCGG CGGACCCGGG CTTCGCCGTG CTGCGCCAGC GGTTGCTCGA CGCGCTGGGC
GCCACCGGCG AGCACCTCGG CTCCGACTTC ATCGCTCCCG GCACGCGCCG GGCTTCCTGA
 
Protein sequence
MATDVGGLTT APAGVAVRGL YRSFNRSGGV LNGLDLDIAP GEFVALIGRS GSGKTTLLRA 
LAGLDRDVEG YGRITVPEQV SVVFQDSRLL PWKRLLANVT LGLEGRDAVE RGLRALAEVG
LAGREQAWPA ELSGGQQQRA ALARSLVREP RLLLADEPFG ALDALTRAQM HRLLRKLCQA
HQPAVLLVTH DVDEAIVLAD RVILLDDGIV ATDLRIDLEQ RSAADPGFAV LRQRLLDALG
ATGEHLGSDF IAPGTRRAS