Gene Caci_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3778 
Symbol 
ID8335131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4269847 
End bp4270896 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID644956918 
ProductAlkanesulfonate monooxygenase 
Protein accessionYP_003114521 
Protein GI256392957 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCC TCTGGTACGT CCCCAACACC ATCGAACCGG GCCACCGCGG CGATGACACC 
GCCGACGGCT GGGGCACGCT CGACTTCACC CTCGATCTGG CTACCACGGC CGAGGCCCAC
GGCTGGTCCG GCGCCCTGTT CGGCACCGGG TGGGGACGCC CCGACACCTT CACCGTCGCC
ACCGCGGTCG CCGCCCGGAC GACCACGTTC AAGCCGCTGG CGGCGATCCG GCCCGGCTAT
TGGCAGCCCG CACACTTCGC GAGCTCGGCG GCGACACTCT CGCATCTGTC GGGCGGCCGG
CTGCTGGTCA ACATCGTCAG CGGCCAGGAC AACCTCGCCG CGTACGGCGA CGCCGAGGGC
GACCAGGCGC AGCGCTACGC CCGGACGAAG GAGTTCATGC GGATCGCCCG GCGGCTGTGG
ACCGAGGAGA ACGTGACCTT CGACGGCGAG TACTTCCGGG TGAGCGACTC CACCGTCGTG
CCGCGGCTTC TCGACGGCGG ACCGCGCCTG TACTTCGGCG GCGCCTCGGC GGCGGCGGAG
CGGGTCTCGG CGACCGAAGC CGACGTCCAG CTGTTCTGGG GCGAGCCGCT GGAGGACATC
GCCGAGCGCA TCGACCGGCT CAAAGCACTG AGCCGCGACC TGGACCGGGA CCTGAAGCCG
TTGGAGTTCG GACTCCGGAT CACCACGCTG GTCCGGGACA CGCCGGAGGA AGCCTGGCGT
GCCGCGCAGG AGAAGGTCGT CAAGCTCGCC GAGCGCACCG GGGTCCCGCG CACCTGGAAG
TCCGCGGTCG GACAGCAGCG GCTGCTCGAT CTGGCAGGGC GCGGCGACGT TCTCGACGAC
TGCCTGTTCA CGACTCCCGG CCGGTACGGC GGCGGCGGCG CCGGCACGAC CTGGCTGGTC
GGCTCGGCCG ACCAGGTCGC GGCGGCCCTG CGCAAGTACG CCGACCTCGG CATCAGCCAC
TTCATCTTGT CGGACACCCC GTACAAGCAA GAGACCGCCC GGGTGGGCGA CGCGCTGATC
TCGCGTCTGC GGGAGCCGGT CGCGGTCTGA
 
Protein sequence
MELLWYVPNT IEPGHRGDDT ADGWGTLDFT LDLATTAEAH GWSGALFGTG WGRPDTFTVA 
TAVAARTTTF KPLAAIRPGY WQPAHFASSA ATLSHLSGGR LLVNIVSGQD NLAAYGDAEG
DQAQRYARTK EFMRIARRLW TEENVTFDGE YFRVSDSTVV PRLLDGGPRL YFGGASAAAE
RVSATEADVQ LFWGEPLEDI AERIDRLKAL SRDLDRDLKP LEFGLRITTL VRDTPEEAWR
AAQEKVVKLA ERTGVPRTWK SAVGQQRLLD LAGRGDVLDD CLFTTPGRYG GGGAGTTWLV
GSADQVAAAL RKYADLGISH FILSDTPYKQ ETARVGDALI SRLREPVAV