Gene Caci_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3776 
Symbol 
ID8335129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4268361 
End bp4269308 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID644956916 
ProductTaurine dioxygenase 
Protein accessionYP_003114519 
Protein GI256392955 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAA ACCAGCTCAC CATCTCCCGT GTCGCCGGCC GGATCGGTGC CGAGATCAGC 
GGGATCGATC TCGCCGAACC GCTCGAGGAG CACACCGTGG CGGCGATCCG TGCCGCGCTG
TTGGAGCACA AGGTCGTCTT CTTCCGCGCG CAGCGCCTCG ACCACGGTTC GCAGATCGCC
TTCGCGCGGC AGTTCGGCGA GCTCACCCAC GCCCACCCGC ACGAGGACGC GCCGCCGGAG
CAGTTCCCGC AGATCCTGAC CATCGATCCG GACCGCTACG CGCAGAAGTA CGGCGAGGAC
TTCCGGCAGG AGTACCGCAA GCGTCAGTAC TCGTACTTCT CGGGGTGGCA CACCGACGTC
ACCGCGGCGG TCAACCCGCC GGCGGGCTCC ATCCTGCGCG CCGAGGCGGT GCCGGAGTTC
GGCGGCGACA CCCAGTGGAC GAACCTGGCC GCCGCCTACG AAGGACTCAG CGCGCCGTTG
CAGCGGCTGG CCGAGTCGCT GCGGGCGGTG CACCGCTTCC GGATCCCGGC CGAGGAGGAG
TCCAAGCGGG CCGAGCGGGT CAACGCCAAC CTGCTGATCG CCGAGCACCC GGTGGTGCGG
GTGCATCCCG AGACCGGGGA GCGGGTGCTG TTCGTCAACC CCGGGTTCAC CGACCACATC
GTCGGGCTGA GCGCGGTGGA GTCCCGCCGC GTCCTGGACC TGTTCTACGA GCACCTCACC
CGGCCCGAAT ACACCGTGCG CTTCCGCTGG CGCGCCGGCG ACGTCGCGTT CTGGGACAAC
CGCGCCACCG CCCACCTGGC TCCCACAGAC CTGGACCATC TGGACGTCCG GCGCACGCTG
CACCGCGTCA CCCTCATCGG CGACCGTCCG GTGGGTGTCG ACGGACGGGA ATCCGAACTC
CTCGCCGGCC GGCCGTTCCT GGCCGACAGC GCCGTCGTCG TGTCCTGA
 
Protein sequence
MPENQLTISR VAGRIGAEIS GIDLAEPLEE HTVAAIRAAL LEHKVVFFRA QRLDHGSQIA 
FARQFGELTH AHPHEDAPPE QFPQILTIDP DRYAQKYGED FRQEYRKRQY SYFSGWHTDV
TAAVNPPAGS ILRAEAVPEF GGDTQWTNLA AAYEGLSAPL QRLAESLRAV HRFRIPAEEE
SKRAERVNAN LLIAEHPVVR VHPETGERVL FVNPGFTDHI VGLSAVESRR VLDLFYEHLT
RPEYTVRFRW RAGDVAFWDN RATAHLAPTD LDHLDVRRTL HRVTLIGDRP VGVDGRESEL
LAGRPFLADS AVVVS