Gene Caci_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3773 
Symbol 
ID8335126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4262244 
End bp4264907 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content70% 
IMG OID644956913 
Producthypothetical protein 
Protein accessionYP_003114516 
Protein GI256392952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACG CCGAACAGGT CCGCCTGAGC GCCGCCGACG CCGAGGGGGA GGCCCATGTG 
CCCTGGCGGG AGTGGGGCCC TTATCTCGCC GAGCGCGCGT GGGGCACCGT CCGCGAGGAC
TATTCCGAAG GCGGTACCGC GTGGGACTAC TTCCCTCACG ACCACGCCAG ATCCCGTGCC
TATCGCTGGA ACGAGGACGG CCTGGCAGGC ATCTGCGACG AGCAGCAGCG GTTCTGCTTC
GCGCTCGCGT TCTGGAACGG CGTGGACCCG ATCCTGAAGG AGCGGCCGTT CGGCGTCAGC
GGCCGGGAGG GCAACCACGG GGAGGACGCC AAGGACTACT GGTGGTTCCT GGACTCCACA
CCCACCCACT CCTGGATGCG CTGGCGATAT CACTACCCGC AGCGGGAATT CCCGTACCAC
GACCTGCTGG AAACCACCCG CGGCCGCGGC GGCGCCGACC CCGAGTACGA GCTCGTGGAC
ACCGGAGTCT TCGACGACGA CCGGTATTGG GCGATCACCG CCGACTACGC GAAGGCCGGA
CCGCACGACC TGTGCATCCG GGTGCGCGCG GAGAACATGG GACTGGAGCC TGCCACGCTG
CATGTGCTGC CCACGCTGTG GTTCCGCAAC ACCTGGTCCT GGGGGTTGCC GGGGCACGAG
GCCGCGCCCC GGATCACCGC CCATGGCGCG CGGCTCGTCG GCGAGCACGA GCATCTCAGA
ACCCTGTCGC TGTTCGGCGA GGGCAGCCCG GAGGTGCTGG TGTGCGACAA CGAGACCAAC
AGCGAACGGC TGTGGGGCTA CGGCGGCTAC AGCGAGTTTC CCAAGGACGG GATCAACGAC
CACATCGTCA ACGGCGCCGA CACGGTCAAT CCGGCGCGCA CCGGCACCAA GGCCGCGCTG
CACTACGTGC TGACCGTTCC GCCCTGGAGG TCCGCGGAGA TCCGGCTGCG GCTGCGGATG
GCAGGGCCCG GCGTCCCGCA CCAGACCCGT GCCAGGCTGC TGGGCCGCCG TTTCGAGGAG
GTGATGGCCG AACGGGAAAG CGAGGCCGAC GACTTCTTCG CGGCACTGAC CCCGGACTCC
TGCTCCGACG ACGAGGCGAT GGTGCTGCGG CAGGCCGTCG GCGGCCTGAT GTGGTCCAAG
CAGTTCTACC ACTACAACGT GCCGCGCTGG CTGGACCACG ACCCCGGCCA CGCTGCGCCG
GTCGGCGGAA GCGCGCGGCG CAACGCGCAC TGGTGGCACA TGTCGGCGCG CGACGTCATC
GCCATGCCCG ACACCTGGGA GTACCCGTGG TTCGCGGCCT GGGACCTGGC CTTCCACGCC
GTCGCCCTGG CCAGGGTGGA TCCGGGCTTC GCCAAGCAGC AGCTGCAGCT GTTGCTGCGG
GACTGGTACC TGCACCCCAG CGGCCAGATG CCGGCCTACG AGTGGAACTT CGGCGACGTG
AACCCGCCGG TCCACGCCTG GGCCGCGCTC CAAGTGTTCG CCGCCGACGG CAGCCGGGAC
TTCGGGTTCC TCAAGCGGGT CTTCCACCGG CTGCTGCTGA ACTTCACGTG GTGGATCAAC
CGCTTGGACG CCGAGGGCAA GAACGTCTTC GAGGGCGGCT TCCTGGGCCT GGACAACATC
GGTCCCTTCG ACCGCAGCGC CGGCGTCCCG TCCGGCGGCC AGCTGGAGCA GAGCGACGGC
ACGGCGTGGA TGGCCTTGTT CACGCTCACG ATGATGGACA TGGCGCTGAT CCTGGCGACC
GAGGACAGCG CCTACAGCGA GCTGGTCACC AAGTTCTTCG AGCACTTCGC CCTGATCGTC
CAGGCGGCCA ACACCCAGGG CCTGTGGAAC CAGGAGGACG GCTTCTACTA CGACGTGATC
CGCGTCCCGG GGGAGGAGGG CGTGCCGCTG CGCATCCGCT CGGTGGTCGG CCTGCTGCCG
CTGAGCGCCA CCGCCACGGT GTCCTCGGCG GCGCTGGCGG CGGTCCCGGA GCTGGAGCAG
CGCCTGGCCT GGTACCGGAC CAACAAGCCG CACTACGCCG ACGTCCTGGC CGGCCGCGTA
CTGCCGGCCA GCGACCTGCG GCTGCTCACC ATGGTCCGGC ACGACCAGCT CCCGCGCCTG
CTGGAACGCA TGCTCGACGA GAACGAGTTC CTCTCGCCCC ACGGCTTGCG AGCCCTGTCG
CGGGCCCATC TCGAGACCCC GTTCACCGTC CGGCTCGGCG AGGCCGACTA CAGCGTCGGC
TACGAACCGG CCGAGTCCCG CTCGACCCTG TTCGGCGGCA ACTCCAACTG GCGCGGCCCG
ATCTGGTTCC CGGTGAACTA CATGCTCATC GACGCCCTCG ACCGCCACCA CCGCTTCTTC
GGCGACCGCC TCCGCGTCCC CTACCCGACG CCCACGACGC GACCGCGAAC CGGCGCGCCG
AGCCGCGAGG CCACCCTCGG CGAGATAGCC GACGACCTGT CAGGCCGCCT GATCTCCCTC
TTCCTCGACG ACGCCGACGG CCGCCGCCCG GTGTTCGGCC ACACCGAGCT CTTCCAGAAG
AACGCGGACT GGCACAACCT CATCCCCTTC CACGAGTACT TCCACGGCGA CACCGGCGCC
GGACTCGGCG CCTCGCACCA GACGGGCTGG ACCGCACTGG TCGTGAATCT GATCCTGCGG
AGGTCGGCGG GGGATGCGCG GTAG
 
Protein sequence
MEDAEQVRLS AADAEGEAHV PWREWGPYLA ERAWGTVRED YSEGGTAWDY FPHDHARSRA 
YRWNEDGLAG ICDEQQRFCF ALAFWNGVDP ILKERPFGVS GREGNHGEDA KDYWWFLDST
PTHSWMRWRY HYPQREFPYH DLLETTRGRG GADPEYELVD TGVFDDDRYW AITADYAKAG
PHDLCIRVRA ENMGLEPATL HVLPTLWFRN TWSWGLPGHE AAPRITAHGA RLVGEHEHLR
TLSLFGEGSP EVLVCDNETN SERLWGYGGY SEFPKDGIND HIVNGADTVN PARTGTKAAL
HYVLTVPPWR SAEIRLRLRM AGPGVPHQTR ARLLGRRFEE VMAERESEAD DFFAALTPDS
CSDDEAMVLR QAVGGLMWSK QFYHYNVPRW LDHDPGHAAP VGGSARRNAH WWHMSARDVI
AMPDTWEYPW FAAWDLAFHA VALARVDPGF AKQQLQLLLR DWYLHPSGQM PAYEWNFGDV
NPPVHAWAAL QVFAADGSRD FGFLKRVFHR LLLNFTWWIN RLDAEGKNVF EGGFLGLDNI
GPFDRSAGVP SGGQLEQSDG TAWMALFTLT MMDMALILAT EDSAYSELVT KFFEHFALIV
QAANTQGLWN QEDGFYYDVI RVPGEEGVPL RIRSVVGLLP LSATATVSSA ALAAVPELEQ
RLAWYRTNKP HYADVLAGRV LPASDLRLLT MVRHDQLPRL LERMLDENEF LSPHGLRALS
RAHLETPFTV RLGEADYSVG YEPAESRSTL FGGNSNWRGP IWFPVNYMLI DALDRHHRFF
GDRLRVPYPT PTTRPRTGAP SREATLGEIA DDLSGRLISL FLDDADGRRP VFGHTELFQK
NADWHNLIPF HEYFHGDTGA GLGASHQTGW TALVVNLILR RSAGDAR