| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3772 |
|---|
| Symbol | |
|---|
| ID | 8335125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4260746 |
|---|
| End bp | 4262062 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644956912 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003114515 |
|---|
| Protein GI | 256392951 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGA CGACCGGGCC GACAGCGTTC CGCGCAAGGA AGCTCCTCAT GCTCTCCTGG
GAGTACCCGC CGGTCTTGGT CGGCGGGCTC GGCCGGCACG TCCACGCGCT GGCCACCACC
CTGGCCCGGG CGGGGCACGA CGTGACCGTC GCGACCCGCC ACGCCCCGGG CGCGCCGCTG
GAGGAGGTCG TCGACGGAGT GCGCGTGGTG CGCGCCCCGC AGGACCCGCC GGTCATCCCG
CTGGACACCG AGCATCTGCT GGCCTGGGCC GTCGCGTTCA ACCACACCTT GACCCGCACC
GCCCTGCACG CCGCCCGCGG GCAGGACTTC GAACTCGTCC ACGCCCACGA CTGGCTGGTC
GCCCACGCCG CCGTCACCGT CAAGGACCAT TTGGGCATCC CGCTGGTGGC CACCATCCAC
GCCACCGAGG CCGGCCGGCA CCAGGGCTGG CTGCCCGGCG ACCTGAACCG CGGCATCCAC
TCCATCGAGT GCTGGCTGGC CCAGGAGTCC GAACGCGTGC TGGTCTGCTC GCAGTACATG
CGCCGGGAGG TCTCGGTACT GCTCGGTGTG CCGGCGTCGA AGATCGACGC CATCCCCAAC
GGAGTGGACA TGCCGCGCTG GCGGGCCGAG CCGAAGCAGG TGGGGCTGGC GCGCGCGAAG
TATGCCGACA GCGGCCCGCT GGTGGGCTTC GCCGGGCGCC TGGTCCACGA GAAGGGAGTG
CAGCACCTGC TGCACGCGCT GCCCGAGCTG CGCCGCACCC ACCCGGGACT GCGGGCGGTC
ATCTGCGGCG ACGGTCCGAA CCGCGGCGAG CTGGAGCAAC TCACCCGGCG CCTGGGGCTG
GAGCACGCGG TCAGCTTCGG CGGATTCCTG GGCTCCCGGC TGTCGGCCAC GATGGCCGCC
ACCGACGCGA TGGTCGTGCC GAGCCTGTAC GAGCCCTTCG GCATGGTGGC CCTGGAAGCC
GCCGCGGCCG GCGCCCCGCT GGCCGTCTCG GCGACCGGCG GCCTGGCCGA GATCGTCGAG
CCCGGCGTCA CCGGCATGAC GTTCCCGGCG CGCGACGAGG GCGCGCTGGC GCGGTCGGTG
TCCGCGCTGC TGGCGGACCG GCCGTCCGCA CGCCGGATGG TGGTCACCGC CAAGGCGATG
GTCCGCAGCC GCTACGGCTG GCCCACCGTG GGCGAACAGA CCGCGGCCGC CTACGCGGCG
GCCGTCAACG ACGCGCCGGC TGTGCCCGCC GGGCCCGAGG AACTATGGCG GTCCCGGCAG
CATCCGATCA CCATCCCGGA GGGCAACCTG CTCGCGTCGG CGGGACTGGC GGCTTGA
|
|---|
| Protein sequence | MTATTGPTAF RARKLLMLSW EYPPVLVGGL GRHVHALATT LARAGHDVTV ATRHAPGAPL
EEVVDGVRVV RAPQDPPVIP LDTEHLLAWA VAFNHTLTRT ALHAARGQDF ELVHAHDWLV
AHAAVTVKDH LGIPLVATIH ATEAGRHQGW LPGDLNRGIH SIECWLAQES ERVLVCSQYM
RREVSVLLGV PASKIDAIPN GVDMPRWRAE PKQVGLARAK YADSGPLVGF AGRLVHEKGV
QHLLHALPEL RRTHPGLRAV ICGDGPNRGE LEQLTRRLGL EHAVSFGGFL GSRLSATMAA
TDAMVVPSLY EPFGMVALEA AAAGAPLAVS ATGGLAEIVE PGVTGMTFPA RDEGALARSV
SALLADRPSA RRMVVTAKAM VRSRYGWPTV GEQTAAAYAA AVNDAPAVPA GPEELWRSRQ
HPITIPEGNL LASAGLAA
|
|---|
| |