Gene Caci_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3769 
Symbol 
ID8335122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4257505 
End bp4258476 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID644956909 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003114512 
Protein GI256392948 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG TCAGAGCATC CGTACGGATC GTGATCGCCC TTGCCGCGGC AGTGCTGGCG 
CTGGTCACAG CATGCAGCTC CAGCAGCAAG CCGGCCGGCG GATCGCCGGG AGCGCAAACC
CCGGTCGCCG CCGCCGTGCC GTCGACCGCG CTTCCCGGCC AGGACGTGCT CTCGGCGATC
CAGGCCGACC CGGCGCTCAA AGCAGAACTC CCGGCAGCGG TCCAGAGCCG CGGAACTCTG
ATCCTCGGCA CGACGAAGAC CACCGGCAAC TCCGGTCTGC CGCACGACGG CGTCGACCCG
ACGGGCAAGA CCGTCGGGCT GGACATCGAC CTGCGCGAAG CAGTCGCCCG CAAGCTCGGC
GTGACCTGGG ACGTGCAGTA CGGCACGTTC CAGACCGTCA TCCCGGGTGT CCAGAACGGC
AAGTACGACG TCGGCCAGGA CAACTTCGGC GTCACGACGG CCCGCGAGCA GGTCGTGGAC
TTCGCCACCT ACCTCGACGA CGGACAGGCG TTCCTCGGCT CCAAGGACGT CTCGGCGACA
TCCATCAGCA CCTTGACGGA CCTGTGCGGC CTCAGCGTCG CGACCAGCCC CGGCACCACC
TTCCAGCAGA TCCTCACCGA CGGCGCCGGC AAGTGCGCGG CAGCCGGGAA GAAGCCCTAC
CAGGTCCAGT ATTTCGCCGA CACCGCCCCG ATCTTCCTGG GGCTCGCCAA CGGCAAAGTG
GACATCTACT TCGGTCCGAC CCTGAGCCTG AAGTACGACG CACAGCACAT CGCCGGAACC
AAGTTCCTCG GCCAGTACAG CTCGACCCCG GTCGGCTTCG TCACGGCCAA GGGCGCCCCC
ACCGGTAAGG CGATCAGCGA CGCGATCAAT GCCCTGATAG CCAGCGGGGA CTACGCGAAG
ATCTTCACCA AGTGGGGTGT CGCGGACACG GCGGTGAAGG CCTCGGAGGT GAATCCGAAG
CCGAAGCTGT GA
 
Protein sequence
MTHVRASVRI VIALAAAVLA LVTACSSSSK PAGGSPGAQT PVAAAVPSTA LPGQDVLSAI 
QADPALKAEL PAAVQSRGTL ILGTTKTTGN SGLPHDGVDP TGKTVGLDID LREAVARKLG
VTWDVQYGTF QTVIPGVQNG KYDVGQDNFG VTTAREQVVD FATYLDDGQA FLGSKDVSAT
SISTLTDLCG LSVATSPGTT FQQILTDGAG KCAAAGKKPY QVQYFADTAP IFLGLANGKV
DIYFGPTLSL KYDAQHIAGT KFLGQYSSTP VGFVTAKGAP TGKAISDAIN ALIASGDYAK
IFTKWGVADT AVKASEVNPK PKL