Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3769 |
Symbol | |
ID | 8335122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4257505 |
End bp | 4258476 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956909 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003114512 |
Protein GI | 256392948 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCACG TCAGAGCATC CGTACGGATC GTGATCGCCC TTGCCGCGGC AGTGCTGGCG CTGGTCACAG CATGCAGCTC CAGCAGCAAG CCGGCCGGCG GATCGCCGGG AGCGCAAACC CCGGTCGCCG CCGCCGTGCC GTCGACCGCG CTTCCCGGCC AGGACGTGCT CTCGGCGATC CAGGCCGACC CGGCGCTCAA AGCAGAACTC CCGGCAGCGG TCCAGAGCCG CGGAACTCTG ATCCTCGGCA CGACGAAGAC CACCGGCAAC TCCGGTCTGC CGCACGACGG CGTCGACCCG ACGGGCAAGA CCGTCGGGCT GGACATCGAC CTGCGCGAAG CAGTCGCCCG CAAGCTCGGC GTGACCTGGG ACGTGCAGTA CGGCACGTTC CAGACCGTCA TCCCGGGTGT CCAGAACGGC AAGTACGACG TCGGCCAGGA CAACTTCGGC GTCACGACGG CCCGCGAGCA GGTCGTGGAC TTCGCCACCT ACCTCGACGA CGGACAGGCG TTCCTCGGCT CCAAGGACGT CTCGGCGACA TCCATCAGCA CCTTGACGGA CCTGTGCGGC CTCAGCGTCG CGACCAGCCC CGGCACCACC TTCCAGCAGA TCCTCACCGA CGGCGCCGGC AAGTGCGCGG CAGCCGGGAA GAAGCCCTAC CAGGTCCAGT ATTTCGCCGA CACCGCCCCG ATCTTCCTGG GGCTCGCCAA CGGCAAAGTG GACATCTACT TCGGTCCGAC CCTGAGCCTG AAGTACGACG CACAGCACAT CGCCGGAACC AAGTTCCTCG GCCAGTACAG CTCGACCCCG GTCGGCTTCG TCACGGCCAA GGGCGCCCCC ACCGGTAAGG CGATCAGCGA CGCGATCAAT GCCCTGATAG CCAGCGGGGA CTACGCGAAG ATCTTCACCA AGTGGGGTGT CGCGGACACG GCGGTGAAGG CCTCGGAGGT GAATCCGAAG CCGAAGCTGT GA
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Protein sequence | MTHVRASVRI VIALAAAVLA LVTACSSSSK PAGGSPGAQT PVAAAVPSTA LPGQDVLSAI QADPALKAEL PAAVQSRGTL ILGTTKTTGN SGLPHDGVDP TGKTVGLDID LREAVARKLG VTWDVQYGTF QTVIPGVQNG KYDVGQDNFG VTTAREQVVD FATYLDDGQA FLGSKDVSAT SISTLTDLCG LSVATSPGTT FQQILTDGAG KCAAAGKKPY QVQYFADTAP IFLGLANGKV DIYFGPTLSL KYDAQHIAGT KFLGQYSSTP VGFVTAKGAP TGKAISDAIN ALIASGDYAK IFTKWGVADT AVKASEVNPK PKL
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