Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3763 |
Symbol | |
ID | 8335116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4251006 |
End bp | 4251863 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956903 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_003114506 |
Protein GI | 256392942 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.375875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCGG GGATCACCCG GGTCGGTGTC GTCGGATCCG GCACCATGGG CGCGGGTATC GCCGAGTTGT TCGCCCTGCA CGGTCTGGAC GTCCGGCTGG CGGTCTCCCG GCCGTCCTCG CTGACCGCGG CGCCGGCGCG CATCGCCGCC TCCCTGGACC GCCGCGTGGC CAAGGGCAGA CTCGCCCCGC ACGAGCGTGA CGCGGCGCTG GCCGCCATCG CCGTCACCGC GGACCTCGGC GATCTGGCCG ACCGCCAGTT GGTGGTGGAG GCGGTCGCCG AGGACGAGGG CCTCAAGCAG AACGTCTTCT CCACCCTGGA CAAGGTGGCC GACCCCGACG CGATCCTGGC CTCGACCACC TCGGCGCTGT CCATCACCCG GCTGGCCGGG GTCGTGGAGC ATCCCGAGCG GGTGCTGGGC GTGCACTTCT TCAACCCGGT GGCGGTGATG GAGCTGGTCG AGCTGGTCCC GACCCTGCTG ACCGCCGACC GCGTGCGCGA GCGCGCCGAG GCCTTCGTGA CCGGGCTGGG CAAGAAGCCG GTGACCGTCG CCGACCGCAG CGGGTTCGTC GTCAACGCCC TGCTGATCCC CTTTCTGCTG GCCGCGATCC GGATGGTCGA GTCCGGGTAC TCCTCGGCCG AGGCCGTCGA CCAGGCCATG GAATCGGGCT GCGCGCACCC CATGGGTCCG CTCAAGCTCG CCGACTTCAT CGGCCTGGAC GTGGTCGCCG CGATCGCCGA GGCCCTGCAC GCGGAGTCCC GCCAGCCGCT GCACGCCCCG CCGCCGCTGC TGTCCCGGAT GGTCGAGTCG GGCATCCTCG GCCGCAAATC CGGGCGCGGC TTCCACTCCT ACCTCTGA
|
Protein sequence | MSAGITRVGV VGSGTMGAGI AELFALHGLD VRLAVSRPSS LTAAPARIAA SLDRRVAKGR LAPHERDAAL AAIAVTADLG DLADRQLVVE AVAEDEGLKQ NVFSTLDKVA DPDAILASTT SALSITRLAG VVEHPERVLG VHFFNPVAVM ELVELVPTLL TADRVRERAE AFVTGLGKKP VTVADRSGFV VNALLIPFLL AAIRMVESGY SSAEAVDQAM ESGCAHPMGP LKLADFIGLD VVAAIAEALH AESRQPLHAP PPLLSRMVES GILGRKSGRG FHSYL
|
| |