Gene Caci_3763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3763 
Symbol 
ID8335116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4251006 
End bp4251863 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID644956903 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003114506 
Protein GI256392942 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.375875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG GGATCACCCG GGTCGGTGTC GTCGGATCCG GCACCATGGG CGCGGGTATC 
GCCGAGTTGT TCGCCCTGCA CGGTCTGGAC GTCCGGCTGG CGGTCTCCCG GCCGTCCTCG
CTGACCGCGG CGCCGGCGCG CATCGCCGCC TCCCTGGACC GCCGCGTGGC CAAGGGCAGA
CTCGCCCCGC ACGAGCGTGA CGCGGCGCTG GCCGCCATCG CCGTCACCGC GGACCTCGGC
GATCTGGCCG ACCGCCAGTT GGTGGTGGAG GCGGTCGCCG AGGACGAGGG CCTCAAGCAG
AACGTCTTCT CCACCCTGGA CAAGGTGGCC GACCCCGACG CGATCCTGGC CTCGACCACC
TCGGCGCTGT CCATCACCCG GCTGGCCGGG GTCGTGGAGC ATCCCGAGCG GGTGCTGGGC
GTGCACTTCT TCAACCCGGT GGCGGTGATG GAGCTGGTCG AGCTGGTCCC GACCCTGCTG
ACCGCCGACC GCGTGCGCGA GCGCGCCGAG GCCTTCGTGA CCGGGCTGGG CAAGAAGCCG
GTGACCGTCG CCGACCGCAG CGGGTTCGTC GTCAACGCCC TGCTGATCCC CTTTCTGCTG
GCCGCGATCC GGATGGTCGA GTCCGGGTAC TCCTCGGCCG AGGCCGTCGA CCAGGCCATG
GAATCGGGCT GCGCGCACCC CATGGGTCCG CTCAAGCTCG CCGACTTCAT CGGCCTGGAC
GTGGTCGCCG CGATCGCCGA GGCCCTGCAC GCGGAGTCCC GCCAGCCGCT GCACGCCCCG
CCGCCGCTGC TGTCCCGGAT GGTCGAGTCG GGCATCCTCG GCCGCAAATC CGGGCGCGGC
TTCCACTCCT ACCTCTGA
 
Protein sequence
MSAGITRVGV VGSGTMGAGI AELFALHGLD VRLAVSRPSS LTAAPARIAA SLDRRVAKGR 
LAPHERDAAL AAIAVTADLG DLADRQLVVE AVAEDEGLKQ NVFSTLDKVA DPDAILASTT
SALSITRLAG VVEHPERVLG VHFFNPVAVM ELVELVPTLL TADRVRERAE AFVTGLGKKP
VTVADRSGFV VNALLIPFLL AAIRMVESGY SSAEAVDQAM ESGCAHPMGP LKLADFIGLD
VVAAIAEALH AESRQPLHAP PPLLSRMVES GILGRKSGRG FHSYL