Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3749 |
Symbol | |
ID | 8335102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4232077 |
End bp | 4233258 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956889 |
Product | histidine kinase |
Protein accession | YP_003114492 |
Protein GI | 256392928 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGC AGGAGCTGCT GCTTTTGTCG GCGGTCGCAG CGGTGGCGCT GTTCGTGGTG GTGACGCTCC CCGCCGACAT CAGGGTTCTG AGATCCCACT CGCCGCAAGA CTGGCTGGTG TCCGCGGCGG TCTACGCGGC CCTGGTGGCG CATCGGCGGC TCCCGCTCGG CACCGTCGCG GTCACCGTCG CCGGCTCGGT GGTGCTGATG GCCGACGGGA TGGCCTACCC GCTGACCTTG CCGGCGGTTT TCTATGTGCT GTACTCGGTC GCGCTGGAAA CGGGTCCGGG GCGCACGCTC GCGGTCGGCG TCACCGTCAA GGCGACGCTG CTCAGCGCCT CGCTCATCAC CCATCCGGGC CTCGCGGGCT TCGTCATCCT GCTGTGGGCG GCGCTGGCCG TGACCAGCGG CGGCGCGTCC CGCAGTCACC GCGGCTACGT CGTCGAGGTC GAGAAGCGGG TCAGACGGGC CGAGCTGGAC CGGGAGGACG AGGCGAATCG CCGGGTCGCC GCGGAACGGC TGCGGATCGC GCGGGACCTG CACGACGCGG TCGGGCATCA CGTCGCTCTG ATCAATGTGC AGGCCGGCGC ACTGGCCTGC CTGCTCGACG ACGAGGACCT CGGCCGTGCC AGGGAGTCCC TCGCGCACAT CCAGCGCGCC GGCGAGGAAG CTCTCGAGGA ACTGCGGCTG ACCGTCGGGC TCCTGCGCGC GCCAGGCGCG GCCGAGCCCG CCGAGCCGGC GGAGCCGGTG CCGGGACTGG ACCAGCTCGA GGAGCTGATC TGCTCGTTCG CCGACACGGG CCTGCGCGTC ACCCGGGAGG TGACCGGGCA CGCCAGACCC CTGCCCGAGG CGGTGGAACT GACCGCCTAC CGGGTCATCC AGGAGTCGCT GACCAACACG CGCAAGCACG CCGGCTGCGA CACCGCCGTG GTGCGGCTCG ACTACACGCT CGGAGCGCTC AGCCTGGCGG TCGAGGACGA GGGACGGCCG GCTGCGCTGG ACACGCCGAC CGCGCGGGCT ACGAGAAACT CGAGGGACAC GCTGGGCGGA CACGGCGTCG TGGGCATGCG GGAGCGGGTG GCCGCCCTGG GCGGCAGGCT GTCGGCAGGA CCGCGGCCCG AGGGCGGCTA CCGCGTCTTC GCCGAGCTCC CGCTGCGAGC AGCCCGGATC GAGGCTTCGT GA
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Protein sequence | MARQELLLLS AVAAVALFVV VTLPADIRVL RSHSPQDWLV SAAVYAALVA HRRLPLGTVA VTVAGSVVLM ADGMAYPLTL PAVFYVLYSV ALETGPGRTL AVGVTVKATL LSASLITHPG LAGFVILLWA ALAVTSGGAS RSHRGYVVEV EKRVRRAELD REDEANRRVA AERLRIARDL HDAVGHHVAL INVQAGALAC LLDDEDLGRA RESLAHIQRA GEEALEELRL TVGLLRAPGA AEPAEPAEPV PGLDQLEELI CSFADTGLRV TREVTGHARP LPEAVELTAY RVIQESLTNT RKHAGCDTAV VRLDYTLGAL SLAVEDEGRP AALDTPTARA TRNSRDTLGG HGVVGMRERV AALGGRLSAG PRPEGGYRVF AELPLRAARI EAS
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