Gene Caci_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3749 
Symbol 
ID8335102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4232077 
End bp4233258 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID644956889 
Producthistidine kinase 
Protein accessionYP_003114492 
Protein GI256392928 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGC AGGAGCTGCT GCTTTTGTCG GCGGTCGCAG CGGTGGCGCT GTTCGTGGTG 
GTGACGCTCC CCGCCGACAT CAGGGTTCTG AGATCCCACT CGCCGCAAGA CTGGCTGGTG
TCCGCGGCGG TCTACGCGGC CCTGGTGGCG CATCGGCGGC TCCCGCTCGG CACCGTCGCG
GTCACCGTCG CCGGCTCGGT GGTGCTGATG GCCGACGGGA TGGCCTACCC GCTGACCTTG
CCGGCGGTTT TCTATGTGCT GTACTCGGTC GCGCTGGAAA CGGGTCCGGG GCGCACGCTC
GCGGTCGGCG TCACCGTCAA GGCGACGCTG CTCAGCGCCT CGCTCATCAC CCATCCGGGC
CTCGCGGGCT TCGTCATCCT GCTGTGGGCG GCGCTGGCCG TGACCAGCGG CGGCGCGTCC
CGCAGTCACC GCGGCTACGT CGTCGAGGTC GAGAAGCGGG TCAGACGGGC CGAGCTGGAC
CGGGAGGACG AGGCGAATCG CCGGGTCGCC GCGGAACGGC TGCGGATCGC GCGGGACCTG
CACGACGCGG TCGGGCATCA CGTCGCTCTG ATCAATGTGC AGGCCGGCGC ACTGGCCTGC
CTGCTCGACG ACGAGGACCT CGGCCGTGCC AGGGAGTCCC TCGCGCACAT CCAGCGCGCC
GGCGAGGAAG CTCTCGAGGA ACTGCGGCTG ACCGTCGGGC TCCTGCGCGC GCCAGGCGCG
GCCGAGCCCG CCGAGCCGGC GGAGCCGGTG CCGGGACTGG ACCAGCTCGA GGAGCTGATC
TGCTCGTTCG CCGACACGGG CCTGCGCGTC ACCCGGGAGG TGACCGGGCA CGCCAGACCC
CTGCCCGAGG CGGTGGAACT GACCGCCTAC CGGGTCATCC AGGAGTCGCT GACCAACACG
CGCAAGCACG CCGGCTGCGA CACCGCCGTG GTGCGGCTCG ACTACACGCT CGGAGCGCTC
AGCCTGGCGG TCGAGGACGA GGGACGGCCG GCTGCGCTGG ACACGCCGAC CGCGCGGGCT
ACGAGAAACT CGAGGGACAC GCTGGGCGGA CACGGCGTCG TGGGCATGCG GGAGCGGGTG
GCCGCCCTGG GCGGCAGGCT GTCGGCAGGA CCGCGGCCCG AGGGCGGCTA CCGCGTCTTC
GCCGAGCTCC CGCTGCGAGC AGCCCGGATC GAGGCTTCGT GA
 
Protein sequence
MARQELLLLS AVAAVALFVV VTLPADIRVL RSHSPQDWLV SAAVYAALVA HRRLPLGTVA 
VTVAGSVVLM ADGMAYPLTL PAVFYVLYSV ALETGPGRTL AVGVTVKATL LSASLITHPG
LAGFVILLWA ALAVTSGGAS RSHRGYVVEV EKRVRRAELD REDEANRRVA AERLRIARDL
HDAVGHHVAL INVQAGALAC LLDDEDLGRA RESLAHIQRA GEEALEELRL TVGLLRAPGA
AEPAEPAEPV PGLDQLEELI CSFADTGLRV TREVTGHARP LPEAVELTAY RVIQESLTNT
RKHAGCDTAV VRLDYTLGAL SLAVEDEGRP AALDTPTARA TRNSRDTLGG HGVVGMRERV
AALGGRLSAG PRPEGGYRVF AELPLRAARI EAS