| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3740 |
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| Symbol | |
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| ID | 8335093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4217458 |
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| End bp | 4219953 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956880 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003114483 |
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| Protein GI | 256392919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00224496 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCGTC GCGTCAGAGT CCTGCGTAAC CCCCGCCTCC GCGCCACCGC CCTCGCCTGC
GCGGGACTGC TCGCCGCCCT CGGCGCGGTA CCGGCAGCAT CGGCGGCACC GGCCGCGTCC
GCCGCCTCAT CCCCCACCCC CTGGCCGTCC ACCCCCGCCT GGCAGTCCTA CGACGAGACC
CCGACCAGCG CGACCGTCTG CCCCACCGCC GTCACCAGTA CCTCCGGTAC CGTCTCCGGC
GCATCCGGGC TGCTGTGCGG CGGCTCCGGA GCAGCGCAGC TCACCCTGGC CTCCGGCGGA
ACCGCACCGA CGATCGTCTT GGACTACGGC AAGGACGTCG GCGGCGTCCC CTTCTTCCAC
GTCACCTCCG AGACCGGCTC GCCGACGCTG CGCGCCGGCT ACTCCGAAGG GCGTGACTCC
ATCAGCTCGA CCGGCGACGG CGCCTCCCCC TGGGCCGAGG GCGACAGCAA CCGCTACGAC
GACTACCCCG TCACCGCCCC TGGGACGATC ACCAACCAGT ACGTCCAAGG TGGCGAGCGC
TACGAGGAGC TCACCCTCAC CACACCGGGC TCGATCACCT TGAGCGGCGC CGGAATCACC
TACATCGCCG ACCGCACCCA GGCCGCCGAC CTCGCAGGCT GGTTCAACTC CAGCAACGCC
GCGCTGAACC AGATCTGGTA CGACTCCGAA TACACCGACC AACTCGACTC GGTCCCCGCC
AAGTCCCTGC CCGGCGCGTG GTCGGTGAGC GGCGGCGTCC TGCGAGCCGG GGGCGATCCC
AGCGGGATAC CGGGCCTGCT GACCGCGGGC TCGTCCTGGG GCGACTACAC CGTCGGCTTC
CAGACCGACG TCGTGACCAA CCAGTCCGGA TGGTTCGTGC GCGGCAAGGA CGTCGGCGAC
GGCTACCTGT TCATCCTCGA CGACAGCACC GACACCGCAG GTGCCGCCAA CACCCTTCAG
GAGTTCGACG AGCACGGCGG CACCTACACC TCCCTGGGCA CCGTCGCCCT GCCCAGCCCG
CTGACCGCCG GCACCTGGCA CACCGTCGCC ACAACGGTCT CCGGCTCCAC GCTCACCGTC
TCCCTCGACG GAAAGCTCCT CAGTACCCTG ACGAACACAG CTCACGCCAC CGGCTCGGTC
GGCTTCCGCG AATTCGCAGG CGAGGCGGCA GACTTCAAAA ACCTCACCGT CACCAGCTCC
TCCGGCGCCA CACTCTTCAG CGATCCTTTG AACTCCTCCG CAGCGCTGGC GAAGTTCGCC
GTCCCCGGGA CCAATCAGTA CGCGTCGATC CTCGACGGCG CCAAGCGCGA CCGAGCGATC
TGGTCCGGGG ACATGAACGT GGAGATCCCG AGCGTCTTCT ACTCCACCGG CAACGCGGCC
TACCTCAAGG GCTCGCTGCA ATTGCTCGCC AGCTACGCAC GCACCGACGG CGCGACAGCA
GGCGACATCC CGCCGCAGTA CCCGCTCGGC ACGTCGCCGC AGACCGGCTC CGGCTGGTTC
TACTCGGCGG ACTACTCGAC CTACTTCGTC CTGGGCCTCG CGGACTACTA CCTGTATTCC
GGCGACACCG CGTTCGTCCA GCAAGAACTT CCGGCTCTCA AAGCCGAGCT CGCCTGGAAC
GCCGGCCTGC TCGACGGCAA CGGCCTGGTC GCCACCGGCA GCGGGAACAA CGCCGACTGG
GACTTCTACG ACTCCGGTAA GAACGGCGAG GTCACCGCCT ACAACCTGCT CTACTACAAG
TCGCTGCTGG ACGGCGCGAC GCTGGCCGGC GCAGCCAGGG ACACCACCGA CGCCGCCGCC
TATACCAACC GCGCCGCCGC GCTGAAGACG GCGATCAACG CCCACCTCTA CAACAGCGGC
AGTGGCCTGT ATTACCTCAG CAACAACGAC ACCACCACCG TCGCGCAGGA CGCCAATGTC
CTCGCCGTCC TCTACGGCGT CGCCCCCGCC TCGGACGTCT CGACGGTTCT GTCCGCTCTG
AAGACCGATC TGTGGACCAC CCCCTACGGT CCCAAGCCGT TCACCGGCAG CACGTACGCG
GACGTCATCA GCCCTTTCAT CAGCGGCTAC GAGCTCGAGG CCAGCTTCGC CGCCAACGAC
ACGGCTGACG CCGAGGCGCT GCTCACCACG GTGTGGGGGC ACATGGCCGC CTCGGGTCCG
GAGCAGACGG GGACCACCTG GGAGAACGTG TCCGGCAACG ACGGGCTGCC CGGGCTCGGC
AGCCGCACCA ACTTGTCGCA CGGCTGGTCG ACGGCTCCGG TCTCCGCGCT GTCCGGGTAC
GTCCTGGGTG TGCAGCCCGC GAGCGCCGGT TTCGCCACCT GGAGCGTGAA GCCGCATCCC
GGGGACCTCG CTTACGCGCA GGGCAGCGTT CCGACGCCGC ACGGTGCGAT CGGCGTCGAT
TGGGCTGGGG AGAACGGGGT TCGCCAGTTC AGCATGGAGG TGACCGCGCC GCCGGGATCA
CCGGCGCCTC GGCGGACGCC AGCTACGTCT ACCTGA
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| Protein sequence | MLRRVRVLRN PRLRATALAC AGLLAALGAV PAASAAPAAS AASSPTPWPS TPAWQSYDET
PTSATVCPTA VTSTSGTVSG ASGLLCGGSG AAQLTLASGG TAPTIVLDYG KDVGGVPFFH
VTSETGSPTL RAGYSEGRDS ISSTGDGASP WAEGDSNRYD DYPVTAPGTI TNQYVQGGER
YEELTLTTPG SITLSGAGIT YIADRTQAAD LAGWFNSSNA ALNQIWYDSE YTDQLDSVPA
KSLPGAWSVS GGVLRAGGDP SGIPGLLTAG SSWGDYTVGF QTDVVTNQSG WFVRGKDVGD
GYLFILDDST DTAGAANTLQ EFDEHGGTYT SLGTVALPSP LTAGTWHTVA TTVSGSTLTV
SLDGKLLSTL TNTAHATGSV GFREFAGEAA DFKNLTVTSS SGATLFSDPL NSSAALAKFA
VPGTNQYASI LDGAKRDRAI WSGDMNVEIP SVFYSTGNAA YLKGSLQLLA SYARTDGATA
GDIPPQYPLG TSPQTGSGWF YSADYSTYFV LGLADYYLYS GDTAFVQQEL PALKAELAWN
AGLLDGNGLV ATGSGNNADW DFYDSGKNGE VTAYNLLYYK SLLDGATLAG AARDTTDAAA
YTNRAAALKT AINAHLYNSG SGLYYLSNND TTTVAQDANV LAVLYGVAPA SDVSTVLSAL
KTDLWTTPYG PKPFTGSTYA DVISPFISGY ELEASFAAND TADAEALLTT VWGHMAASGP
EQTGTTWENV SGNDGLPGLG SRTNLSHGWS TAPVSALSGY VLGVQPASAG FATWSVKPHP
GDLAYAQGSV PTPHGAIGVD WAGENGVRQF SMEVTAPPGS PAPRRTPATS T
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