Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3738 |
Symbol | |
ID | 8335091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4216349 |
End bp | 4216987 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956878 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_003114481 |
Protein GI | 256392917 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.152483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TCAGCACTAG CAGCACCATC AGCATCATCG GCGCCGGGAA CATGGCCCGC ACCCTCGGCA CGCTGGCCGT GGCAGGCGGC AACACCGTCG AGATCATCGG CCGCGATCAG TCCAAGGCCG CCGCCGTGGC CAAGGCCCTC GGCAGCGGTG CCACCACCGG TGAGTGGGGC GCCGTACCGG CCGGGGACAT CGTCATCGTG GCCTTGTTGG CCGACGCTGT CGCTCCGACC GTCGCCCAGT ACGGCGACGC CCTCGCGGGC AAGGTGATCG TCGACATCAG CAACCCCTTC AATGCCGCGG CCGACGGGCT CGCCTACCGC GGGGAGACCT CGATCGCGCA GGAAGCCGCG AAGGTCGCCC CGGCCGGCGC CAGCGTGGTG AAGGCGTTCA ACACCATCTT CGGCCATGTC CTGGACAAGG GAGGACGGCC CGACGTCTTC TTCGCCGGCG ACGATGCGCA GGCCAAGGCG GACGTGGAGG TGTTCATCAA GAGTCTCGGG CTGCGCCCGC TGGACGTCGG CGGCCTGCAC ATGGCGCACT GGTTGGAGGG AGCCGGCTTG GTCGTGATGG GCCTCGCCCG CAACGGCGTC GGGCACTGGG ACCTCGGCCT CGGCGTCGCC GAATTCTAG
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Protein sequence | MSTISTSSTI SIIGAGNMAR TLGTLAVAGG NTVEIIGRDQ SKAAAVAKAL GSGATTGEWG AVPAGDIVIV ALLADAVAPT VAQYGDALAG KVIVDISNPF NAAADGLAYR GETSIAQEAA KVAPAGASVV KAFNTIFGHV LDKGGRPDVF FAGDDAQAKA DVEVFIKSLG LRPLDVGGLH MAHWLEGAGL VVMGLARNGV GHWDLGLGVA EF
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