Gene Caci_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3738 
Symbol 
ID8335091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4216349 
End bp4216987 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID644956878 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_003114481 
Protein GI256392917 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.152483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCAGCACTAG CAGCACCATC AGCATCATCG GCGCCGGGAA CATGGCCCGC 
ACCCTCGGCA CGCTGGCCGT GGCAGGCGGC AACACCGTCG AGATCATCGG CCGCGATCAG
TCCAAGGCCG CCGCCGTGGC CAAGGCCCTC GGCAGCGGTG CCACCACCGG TGAGTGGGGC
GCCGTACCGG CCGGGGACAT CGTCATCGTG GCCTTGTTGG CCGACGCTGT CGCTCCGACC
GTCGCCCAGT ACGGCGACGC CCTCGCGGGC AAGGTGATCG TCGACATCAG CAACCCCTTC
AATGCCGCGG CCGACGGGCT CGCCTACCGC GGGGAGACCT CGATCGCGCA GGAAGCCGCG
AAGGTCGCCC CGGCCGGCGC CAGCGTGGTG AAGGCGTTCA ACACCATCTT CGGCCATGTC
CTGGACAAGG GAGGACGGCC CGACGTCTTC TTCGCCGGCG ACGATGCGCA GGCCAAGGCG
GACGTGGAGG TGTTCATCAA GAGTCTCGGG CTGCGCCCGC TGGACGTCGG CGGCCTGCAC
ATGGCGCACT GGTTGGAGGG AGCCGGCTTG GTCGTGATGG GCCTCGCCCG CAACGGCGTC
GGGCACTGGG ACCTCGGCCT CGGCGTCGCC GAATTCTAG
 
Protein sequence
MSTISTSSTI SIIGAGNMAR TLGTLAVAGG NTVEIIGRDQ SKAAAVAKAL GSGATTGEWG 
AVPAGDIVIV ALLADAVAPT VAQYGDALAG KVIVDISNPF NAAADGLAYR GETSIAQEAA
KVAPAGASVV KAFNTIFGHV LDKGGRPDVF FAGDDAQAKA DVEVFIKSLG LRPLDVGGLH
MAHWLEGAGL VVMGLARNGV GHWDLGLGVA EF