| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3728 |
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| Symbol | |
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| ID | 8335081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4197695 |
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| End bp | 4201357 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956868 |
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| Product | urea carboxylase |
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| Protein accession | YP_003114471 |
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| Protein GI | 256392907 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0435399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCC GCTTCGACAG TGTCCTGATA GCCAACCGCG GCGAGATCGC CCGGCGGGTC
ATCCGCAGCG CCCGGGCCCT GGGCCTGCGC ACCGTCGCGG TGTACTCCGA CGCCGACCGC
GCCGCACCGC ACGTCAGGGA GGCCGACGAG GCAGTACGGC TCGGCCCGGC GCCCGCGCGG
GAGAGCTACC TGCGGGCCGA CGCCGTCGTG GAGGCGGCGC TCAGGTTCGG CGCGGCCGTC
CACCCCGGTT ACGGGTTCCT GTCCGAGAAC GCCGGGTTCG CCCGCGCCGT CGAGGCCGCC
GGCCTGGTCT TCGTGGGACC GACCCCCGAC CAGATCGAGG CGTTCGGTGC CAAGCACACC
GCGCGCGCTC TGGCCGCCGA GGCGGGGGTG CCGATGCTCG CCGGGACCGG CTTGCTCACC
GGCGAGCAGG AGGCGGTCGC CGAGGCGCTC CGGATCGGCC TGCCGGTGAT GCTGAAGGCG
ACCGGCGGCG GCGGCGGGAT CGGGATGGCC GCGTGCACGA GCACCGAGGA GGTCCGGCAG
GAGTTCGCGC GGGTCGCGCG GCTGGCCGAG TCGAACTTCG GCGCGGGCGG TGTTTTCCTG
GAACGGCTGG TCCATCCGGC GCGGCACGTC GAGGTACAGC TGTTCGGCGA CGGCGCCGGC
CGGGTCGCGG TCTTCGGGGA CCGCGACTGC TCGCTGCAGC GGCGCAATCA GAAGGTCATC
GAGGAGGCTC CGGCTCCGAA CCTGCCCGAT CACGTGCGCA AGCTGCTGCA CGAGTCCGCG
CGCACGCTCG CCGAGCAGGT TCGCTACCGG TCGGCGGGCA CGGTGGAGTT CGTCTACGAC
CCGGTGCGCG AACAGGCGTC GTTCCTGGAG GTCAACACCC GGCTCCAGGT CGAGCACCCG
GTGACCGAGG AGGTCTTCGG CATCGATCTG GTCGCCCTGA TGCTGCGCCT GGCCCGTGAC
GGCGCCGCGG GCCTGGACGA GGAGATGTTC GGCGTGCGGC AGCCGGCCGG CCACTGCGTC
GAGGCCCGGG TCTACGCCGA GGATCCCGGC AAGGGCGGAG CGCCCAGCTC GGGGCTGGTC
ACCTCGGCCG TCTTCCCGGG GCAGGGCACC GGGCCGCTGG CCGGGATCCG GGTCGACGGC
TGGGTGGAGA CGGGATCGGA AGTCTCGCCG TACTACGACC CGATGCTCGC CAAGGTGATC
GCCGCCGGGC CCAGCCGGGA CGACGCGCTG GACGTGCTGC GGGAGGGTCT GGACGCCAGC
GGGGTCGACG GCGTGGTCAC GAACCTGGGG TTGCTCAGGG CCCTGACAGA CGACCCGGCG
CTGCGCGCGG CGACCCACTC GACCTCGACA CTGCAGTCCC TCACCGATCC CGAACCGCGG
ATCGACGTGG TCGTCCCGGG CTTGCAGACC ACTGTCCAGG ACCTGCCGGG CCGCACCGGG
CTGTGGTCGG TCGGCGTGCC GCCGAGCGGG CCGTTCGACG CCGTCTCGCA CCAGGAGGCG
AACCTCGCCG TCGGCAACCC GGCCGGCGCC CCGGCGCTGG AGGCCACCGC CGCCGGTCCC
ACGCTGCGGT TCTCGGCGGA CACCGTCGTC GCCGTGACCG GGGCGCCGGT TCAGGTCACC
GTGGACGGCG AGCCGGTGCC GATGTGGGAG CCGGTCCAGA TCGCCCCCGG CTCGACGCTC
GCCGTCGGCA CGGTGACCGG TCCCGGGCTG CGGGTCTACG TGGCCGTGCG GGGCGGGATC
GACGTCCCGC GCTATCTGGG CAGCGCCTCG ACCTTCACCC TGGGCGGATT CGGCGGCCAC
GGCGGCCGGG CGCTGCTGGC CGGCGACGTG CTCCGGCCCG GATCGCCGGA TTCCGCCGGG
CGCCACCGGG CCTTCCCGGC CGGCGAGCAC CTCACGCGCG TCGGCCCGCC GACCCCGCGG
CACCGCCGGC CTGCCATGAC CGGTACCTGG GAGATCGCCG TCACCGAGGG ACCGCACGCC
GCGCCGGAGT TCTTCACCCG CGCGGACATC GACACGCTGT ATCAGAGCAC GTATACGGTC
CACCACAACT CGGCGCGCAC CGGAGTGCGG CTGATCGGTC CGCGCCCGCA GTGGGCCCGC
GGCGACGGCG GCGAGGCGGG TCTGCACCCC TCGAACATCC ACGACACCCC GTACGCGGTC
GGAGCCCTGG ACTTCACCGG CGACACGCCG ATCATTCTCG GCCCGGACGG CCCGAGCCTG
GGCGGCTTCG TGTGTCCGGC GGTGGTGGCC AGTGGCGATC TGTGGAAGCT CGGACAGCTC
CGACCCGGCG ACGGCGTCCG GTTCGTCCCC GTCCGGGAGA GCGACGCCGC CGCGCTGATC
GACGATCGCG CCTCGACCGT CGTCCTGCTG CGCGGCGGCG ACGGCGACGA CGGCGTCCTG
GGCCGGATCG AAGCCGCCGA CGGCCGCCCG GGCGTGACCT ACCGCCGCGA CGGGAATGAC
AACGTGCTGG TCGAGTACGG TCCCATGACG CTCGACATCG GGCTGCGGAT GCGGGTCCAC
GCGCTGCGGC AGCGCCTGGC CGAGCACGGG CCGAGGACCG GGATCCTCGA TGTCACACCG
GGCATCAGGT CCCTGCAGGT CCACACCGAC GCCGGTGTGT TGGGCGCCTC GCAGACGGCG
GCGCTGCTGC GCGAGTTGGA GGAGACGATC CCGCCGACGC ACGAGCTGGT CGTGCCGTCC
CGGACGGTGC GACTGCCGCT GTCCTGGGAC GATCCGGCGA CCCGGCTGGC GATCGAGCGG
TACATGGCCG GCGTCCGGGA CGACGCGCCG TGGACGCCGT GGAACATCGA GTTCATCCGG
CGTATCAATG GTCTGTCGGA CGTCGAAGAC GTGCGGCGCA TCGTCTATGA CGCCTCCTAC
CTGGTCCTGG GACTCGGTGA CGTCTACCTC GGCGCACCGG TCGCCACCCC GCTGGACCCC
AGGCACCGCC TGGTGACGAC GAAGTACAAC CCGGCGCGCA CCTGGACGGC CGAGAACTCC
GTCGGCATCG GGGGCGCGTA CATGTGCATC TACGGCATGG AGGGCCCCGG CGGTTACCAA
TTCGTCGGAC GCACCGTCCA GGTGTGGAAC CGCTTCCGGC GCGGCGGGCT GTTCCGGGAG
CACCCCTGGG CGCTGCGGTT CTTCGACCAG ATCCAGTGGT ACCCGGTCTC CGCCGAGGAG
TTGCTGGAGC TGCGGGCCGA GACCGACGCC GGGCGGGGAG ACTTCGAGAC CGTCGAGGGC
GAGTTCTCGA TCGCCGACTA CGAGCGGTTC TTGACACGCG AGGCGAGCTC GATCGCCGAG
TTCCGCGCGA CACAGGCCCG CGCGTTCGAC GAGGAGAAGG AGCGGTGGCG CGCGTCCGGG
GAGTTCGACC GGCAGGGCGG CGAGCCGGAG ATCGCCGGCG CGGGCGTCGG AATGTCCGAT
ACCCCGGCGG TGCCGGAGGG CGCGACCGTG GTGTCGGCGC CGTTCCTGTC GACGGTGTGG
CAGGTGCTGG TGGAACCGGG CGCGACGGTC GCCACGGGGG AGAAGGTCTT GGCCGTGGAG
GCGATGAAGA TGGAGTCGGC GGTGCTCGCT CCGTGCTCGG GGCTGGTGCT CGGGGTCTAT
GCCAAGCCGG GCGACCAAGT GTCGGCCGGG CAGACGCTGC TGATGATCGC CGGCGCCCGG
TGA
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| Protein sequence | MSARFDSVLI ANRGEIARRV IRSARALGLR TVAVYSDADR AAPHVREADE AVRLGPAPAR
ESYLRADAVV EAALRFGAAV HPGYGFLSEN AGFARAVEAA GLVFVGPTPD QIEAFGAKHT
ARALAAEAGV PMLAGTGLLT GEQEAVAEAL RIGLPVMLKA TGGGGGIGMA ACTSTEEVRQ
EFARVARLAE SNFGAGGVFL ERLVHPARHV EVQLFGDGAG RVAVFGDRDC SLQRRNQKVI
EEAPAPNLPD HVRKLLHESA RTLAEQVRYR SAGTVEFVYD PVREQASFLE VNTRLQVEHP
VTEEVFGIDL VALMLRLARD GAAGLDEEMF GVRQPAGHCV EARVYAEDPG KGGAPSSGLV
TSAVFPGQGT GPLAGIRVDG WVETGSEVSP YYDPMLAKVI AAGPSRDDAL DVLREGLDAS
GVDGVVTNLG LLRALTDDPA LRAATHSTST LQSLTDPEPR IDVVVPGLQT TVQDLPGRTG
LWSVGVPPSG PFDAVSHQEA NLAVGNPAGA PALEATAAGP TLRFSADTVV AVTGAPVQVT
VDGEPVPMWE PVQIAPGSTL AVGTVTGPGL RVYVAVRGGI DVPRYLGSAS TFTLGGFGGH
GGRALLAGDV LRPGSPDSAG RHRAFPAGEH LTRVGPPTPR HRRPAMTGTW EIAVTEGPHA
APEFFTRADI DTLYQSTYTV HHNSARTGVR LIGPRPQWAR GDGGEAGLHP SNIHDTPYAV
GALDFTGDTP IILGPDGPSL GGFVCPAVVA SGDLWKLGQL RPGDGVRFVP VRESDAAALI
DDRASTVVLL RGGDGDDGVL GRIEAADGRP GVTYRRDGND NVLVEYGPMT LDIGLRMRVH
ALRQRLAEHG PRTGILDVTP GIRSLQVHTD AGVLGASQTA ALLRELEETI PPTHELVVPS
RTVRLPLSWD DPATRLAIER YMAGVRDDAP WTPWNIEFIR RINGLSDVED VRRIVYDASY
LVLGLGDVYL GAPVATPLDP RHRLVTTKYN PARTWTAENS VGIGGAYMCI YGMEGPGGYQ
FVGRTVQVWN RFRRGGLFRE HPWALRFFDQ IQWYPVSAEE LLELRAETDA GRGDFETVEG
EFSIADYERF LTREASSIAE FRATQARAFD EEKERWRASG EFDRQGGEPE IAGAGVGMSD
TPAVPEGATV VSAPFLSTVW QVLVEPGATV ATGEKVLAVE AMKMESAVLA PCSGLVLGVY
AKPGDQVSAG QTLLMIAGAR
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