Gene Caci_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3727 
Symbol 
ID8335080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4196982 
End bp4197698 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID644956867 
Producturea carboxylase-associated protein 1 
Protein accessionYP_003114470 
Protein GI256392906 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.592231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CCGACTCAGT GCTCGATTGG TCCAGCCCTT TGGCCGACGG CGAGATCGTC 
CGCGACGACC GCGTCGCCCC CCGCGCCTCC TGGTCGGCCG TGGTCCCGGC CGGCCACGTG
CTGACGATCG TCGACGTGGG CGGCAACCAG TCGGCGGACT GCCTCATCTT CGATGCCGCT
GACCCGGCCG AGCGCTACAG CGTTCCGGAC ACCATCACCT GGCAAGGGAA CGTCTACGTG
CGCACAGGCA CAGTCCTGCG CTCCAATCTC GGCTCCCCGC TCATGACGGT CGTCGGCAAC
GAGATCGACC GGCAGGACAC CATCGGCGGA GCCTGCTCGA AGGAGTCGAA CACCCTGCGC
TACGGCCACC ACACCGCGTT CCACCACGCC TGCCGCGAGA ACTTCCTGCT GGAAGGCGCC
AAGCACGGTC TCGGCGCGCG CGACCTGGTC TCCAACCTGA ACTGGTTCAT GAACGTCCCG
GTCGAGGCCG ACGGCTCGCT GGGGATCGTC GACGGCATGA GCGCCCCGGG CAAGCGGGTC
GCGCTGCGGG CCGAGCGCGA GGTGTTGGTC GTGGTCTCGA ACTGTCCTCA GATGAACAAT
CCTTGCAACG CCTTCGACTG CACCCCGCTG CGGATGATCG TCACGGCGCC GTCCGCGCGG
ACCGTGGAAG CCGCGCAGAC CGCGGAAGCC GTGGAAGCTG TGGAGGCGAC CGCGTGA
 
Protein sequence
MMTTDSVLDW SSPLADGEIV RDDRVAPRAS WSAVVPAGHV LTIVDVGGNQ SADCLIFDAA 
DPAERYSVPD TITWQGNVYV RTGTVLRSNL GSPLMTVVGN EIDRQDTIGG ACSKESNTLR
YGHHTAFHHA CRENFLLEGA KHGLGARDLV SNLNWFMNVP VEADGSLGIV DGMSAPGKRV
ALRAEREVLV VVSNCPQMNN PCNAFDCTPL RMIVTAPSAR TVEAAQTAEA VEAVEATA