| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3712 |
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| Symbol | |
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| ID | 8335065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4171779 |
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| End bp | 4175957 |
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| Gene Length | 4179 bp |
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| Protein Length | 1392 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956852 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003114455 |
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| Protein GI | 256392891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.173046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0203648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTC GGGTGCACAG TGTGACGCGG CTTCGGCACG GCGGCCGGGT GGTGGCGGCG
GCGACCGCTG TCATGGCTCT GATATTCGGG TCCGTCGCTG GGGCGCACGC GAGCCCGGTG
CAGGGCAGAG ATGTCGCGCA GAGCAGGGAT GTCGCGGCCG CAACGGCGCC GGCTTCTGTG
GGGACTGCTC ATACGGTCAC GTATGACGGG TACTCGTTCC TCGTTGACGG CAGTCGCACC
TACCTGTGGT CTGGTGAGTT CCACTACTTC CGGCTGCCGA GTCCGAGTTT GTGGCTGGAC
ATCTTCCAGA AGATGAAGGC GGCTGGGTTC AATGCCACGT CGCTGTACTT CGACTGGGGC
TACCACTCGC CGGCGCCCGG GGTGTACGAC TTCACCGGCG TGCGGGATGT CGATGAGTTG
CTGGACATGG CGCAGCAGGC GGGCCTGTAT GTGATCGCGC GGCCCGCGCC GTACATCAAC
GCCGAGGTGG ACGGTGGCGG GCTGCCGGCT TGGCTCGGTA CGAAGGACGT GAAGAACCGG
ACCGACGACC CGGCTTTCCT GTCCTACGCC GATCAGTGGC TCACCCAGAT CGACGCGATC
CTCGCGCGGC ATCAGCTCAC CAATGGCACC GGTAGCGTGA TCGCATATCA GGTCGAGAAC
GAGTACTACA ACGGTTCGGC GACCGGCCGC GCCTACATGC AGCACCTTGA GGACAAGGCT
CGCGCCGACG GCATCACCGT GCCGCTGACC GGCAACAACA ACGGGACGTT CGGCAGCGGG
ACCGGTGCGC TGGACGTCGA CGGTCCCGAC TCCTACCCGC AGGGCTTCAA CTGCTCGAAT
CCGAGCGCGT GGAACGGTGT TCCCGACATC AGCTACGACC ACCCGGCCGG CAAGCCGCTG
TACACCCCGG AGTTCCAGGG CGGCGCCTTC GACCCCTGGG GCGGCCCGGG CTACGACAAG
TGCGCCCAGC TGATCAACGA TCAGTTCGCT GATGTCTTCT ACAAAAACAA CATCGCCGTC
GGCGCGACCG CGCAGAGCTT CTACATGACC TACGGCGGCA CCAACTGGGG CTGGCTCGGC
GAGCCCGAGA ACTACACCTC CTACGACTAC GGCGCGGCGA TCCGGGAGAC CCGGCAGCTC
GATCCGAAGT ACTCCGAGGA CAAACTGATC GGCGACGCGC TGGCCTCGAT GCCGGACCTG
ACCAAGACCG ACCCGATCCA GACCACCGCG CCGGACGACG CCGCGATCGT CGACACCGCG
CGGCGCAACC CCGACACCGG CGCGCAGTTC CATGTACTGC GGCACTCGGA CTCGACCTCG
ACCGCGGTGG ACAACACCCA CATCGCCGTT GATTTCAACG CGCTTCCGGC CGGGAACTAC
ACCTACGACG ACGTCGATCC GGTCCTGCAG TACACCGGCG CCTGGTCGCA CGTCGCCAAC
CAGAGCTACA CCGGCAGCGA CTTCAAGAAC ACTGAGTCGT TCTCCAACAC CGCCAACGAC
TCACTGACGG TTCCGTTCAC CGGCACCGCG ATCCGGTGGA TCGGCTCGAA GACCAACAAC
CACGGCTATG CCGACGTCTA CCTCGACGGC GTCAAGCAGA CCACCGTCGA CTGCTCCGGC
AGCCAGAGCC AGGCGGTGCT CTACCAGGCG AGCGGCCTGA CCGCCGGACC GCACACCCTC
AAGATCGTCG TGGACGGCAC CCACGCCTCC GGCTCGACCG ACAACTTCGT GTCCGTGGAC
GCCGTCGACC TGCCGCCCGC CGGAAGCGGA GCCGGCCCGA CGTATCCGAG CGTCCCCCAG
GAACCGGGCA CCGCGATCAC CCTCAACGGG CGCGAATCGG ACCTGCTGGT CGCGGACACC
AAGATCGGCG ACTCGCGGTT GCAGTACTCG ACCTCGCAGC TGATGACCTC GCAGACGATC
GGTAGCCGTG ACGTCGCAGT GTTCTACGGC GACAAGGGCA CCGACGGCGA AACGGTCCTG
CGGTACGCGA GCCGGCCGAC CGTCCAGAGC ACCGACGGCG CCGTCAAGGT GACCTGGGAC
GCCGCCAGCG GCGACCTGCG GCTGAACTAC CAGCACTCCG GCCTGACCCG GGTGACCATC
ACCGGCAGCG GCTCGCGTCC GCTGCTGCTC CTGCTCGCCG ACAAGCCGAC CGCCGAGACG
TTCTGGACGC AGAACACTGC CACGGGTCCG GTTCTCGTGC GCGGTACCCA TCTGTTGCGG
ACCGCCGCGA GTGCTGACGG TGGCAGGGTC CTGAATCTGA CCGGCGACAA CGGCACCGAC
CCCGGTATCG AGGTCTTCAC CTCCGCCACG TCGGTGACCT GGAACGGCCA TGCGGTGCAC
GCCAAGGGCT CCGCCACCGG AAGCCTCGTC GGCACGGTAT CCACCGCGGC GGCGATCACT
CTGCCCGCGC TCACCGACTG GAAGTACCAG GCTGAGTCGC CGGAGGCACA GTCAGGCTTC
GACGACTCGA CCTGGACGGT CGCGGACAAG ACGAGCACCA ACAGCGTCAC CGGTGTCGGT
TCGCTACCGG TTCTCTACGC CGACGACTAC GGCTTCCACA CCGGCAGCAC CTGGTACCGC
GGCAGGTTCC GCTCCTCCCC CACGGCCACC GGCATCCACC TGGTCTCTGA TTCGGGCGGA
GGCGCGCAGG CCTTCTCGGT CTGGCTGAAC GGGACATTCC TGGGCAGCTC CACCAACGGC
AGCGGCGACT TCACCTTCCC GGCCGGATCG CTGAAGCAGA GCGGGGACAA CATCGTCTCG
GTGCTCACCG TGAACATGGG TCACGAAGAG GACTACAACT CCACCAACAA CAGCACCTCT
GCGCGTGGGC TCACCAGTGC CTCGCTCGTC GGAGCTCCGC TGACGTCGGT GACCTGGCGG
TTGCAGGGCG TCCGCGGCGG CGAGCAGGAG ATCGACCCGG TGCGCGGTCC GCTGTCGACC
GGCGGTCTGT ACGGCGAGCG CGCCGGCTGG CCGCTGCCCG GCTTCGACGA CTCGGCGTGG
AAGCCGGTGA GCCTTCCGGC CCACGACACG ACCCCGGGCG TCGCCTGGTA CCGCACGACC
GCGAACCTGA ACCTGCCGAA GGGTCAGGAC ACCTCGCTCG GTCTCACCAT CACCGACGAT
CCGTCGAAGA AGTATCGCGC GGAGCTGTAC GTCAACGGCT GGATGGTCGG CAACTACGTC
AACTACCTCG GCCCGCAGCA CAGCTTCCCG ATCCCCAACG GGATCCTGAA GACCGACGGG
AGCAACACGA TCGCGATCGC GGTGTGGAAC CTGGACGGCA GCACCGGCGG CCTCGGCACG
GTCTCGCTCA CCGACTACGG CAGCTACGCG TCCTCGCTCA AGGTGGATAC GGTCGACAGT
CCCCGGTACA ACAAGGCCAC GTACGCGATG CCCGCGGCGC CGGGCGTGAA CGTGAACCTT
CAGGTCCCTG ACACCGCGCA AGCCGGGACC GCCTTCACCG CCACCGCGAC CGTGTCGGTC
CCGGCCGGTC GGGGACGCGC GAGCGGACTC ACGCCCTCGC TGAGCCTTCC GCCCGGCTGG
ACCGCCAGCG CCCCGAGCCC GGCAACTATC AGCTCTGTGA AGGACGGACA GTCGGCGACG
TTCACCTGGA GCGTGCAGCC ATCAGCCGGC GCCCAACCTT CAGCCGCCGC GCTCACCGCG
ACGATCGGCT ACACACAGCA CGACAAACCC GGCACGGCGA AGGACGAGCG CGTCGTCGGC
TACTACGTGC CGCCCGCAGC GGGTCAGGAC AACATCAGCG ACCTGGCATT CACCGCCGCG
ACCAACGGCT GGGGACCGGT CGAACGCGAC ATGAGCAACG GCGAGCAGGC CGCCGGCGAC
GGACACACCA TCACCATCAA CGGTGCGACC TCCGCCAAGG GCCTCGGCAC GAACGCGACC
AGCGACGTAC GGATCTACCT CGGCGGCCAC TGCACCACCT TCACCGCCTC GGTGGGCGTG
GACGACGAGA CCAACGGCGC CGGCACCGTC ACCTTCAGCG TCCTCGCCGA CGGCAGAACA
CTGACCACCA CCCCCGTCAT CGGCGGCCAC CAGGCAGCCA CGCAGCTGTC AGCCGACCTC
ACCGGCGCCC AGATGCTCGA CCTGGTGGTC GGCGACGGCG GCGACGGCAA CGCGCACGAC
CACGGGGACT GGGGAGGCGC GCAGATCACT TGCTCCTGA
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| Protein sequence | MRLRVHSVTR LRHGGRVVAA ATAVMALIFG SVAGAHASPV QGRDVAQSRD VAAATAPASV
GTAHTVTYDG YSFLVDGSRT YLWSGEFHYF RLPSPSLWLD IFQKMKAAGF NATSLYFDWG
YHSPAPGVYD FTGVRDVDEL LDMAQQAGLY VIARPAPYIN AEVDGGGLPA WLGTKDVKNR
TDDPAFLSYA DQWLTQIDAI LARHQLTNGT GSVIAYQVEN EYYNGSATGR AYMQHLEDKA
RADGITVPLT GNNNGTFGSG TGALDVDGPD SYPQGFNCSN PSAWNGVPDI SYDHPAGKPL
YTPEFQGGAF DPWGGPGYDK CAQLINDQFA DVFYKNNIAV GATAQSFYMT YGGTNWGWLG
EPENYTSYDY GAAIRETRQL DPKYSEDKLI GDALASMPDL TKTDPIQTTA PDDAAIVDTA
RRNPDTGAQF HVLRHSDSTS TAVDNTHIAV DFNALPAGNY TYDDVDPVLQ YTGAWSHVAN
QSYTGSDFKN TESFSNTAND SLTVPFTGTA IRWIGSKTNN HGYADVYLDG VKQTTVDCSG
SQSQAVLYQA SGLTAGPHTL KIVVDGTHAS GSTDNFVSVD AVDLPPAGSG AGPTYPSVPQ
EPGTAITLNG RESDLLVADT KIGDSRLQYS TSQLMTSQTI GSRDVAVFYG DKGTDGETVL
RYASRPTVQS TDGAVKVTWD AASGDLRLNY QHSGLTRVTI TGSGSRPLLL LLADKPTAET
FWTQNTATGP VLVRGTHLLR TAASADGGRV LNLTGDNGTD PGIEVFTSAT SVTWNGHAVH
AKGSATGSLV GTVSTAAAIT LPALTDWKYQ AESPEAQSGF DDSTWTVADK TSTNSVTGVG
SLPVLYADDY GFHTGSTWYR GRFRSSPTAT GIHLVSDSGG GAQAFSVWLN GTFLGSSTNG
SGDFTFPAGS LKQSGDNIVS VLTVNMGHEE DYNSTNNSTS ARGLTSASLV GAPLTSVTWR
LQGVRGGEQE IDPVRGPLST GGLYGERAGW PLPGFDDSAW KPVSLPAHDT TPGVAWYRTT
ANLNLPKGQD TSLGLTITDD PSKKYRAELY VNGWMVGNYV NYLGPQHSFP IPNGILKTDG
SNTIAIAVWN LDGSTGGLGT VSLTDYGSYA SSLKVDTVDS PRYNKATYAM PAAPGVNVNL
QVPDTAQAGT AFTATATVSV PAGRGRASGL TPSLSLPPGW TASAPSPATI SSVKDGQSAT
FTWSVQPSAG AQPSAAALTA TIGYTQHDKP GTAKDERVVG YYVPPAAGQD NISDLAFTAA
TNGWGPVERD MSNGEQAAGD GHTITINGAT SAKGLGTNAT SDVRIYLGGH CTTFTASVGV
DDETNGAGTV TFSVLADGRT LTTTPVIGGH QAATQLSADL TGAQMLDLVV GDGGDGNAHD
HGDWGGAQIT CS
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