| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3709 |
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| Symbol | |
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| ID | 8335062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4165552 |
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| End bp | 4167483 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956849 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003114452 |
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| Protein GI | 256392888 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.155925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0144846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCGC CATCTCGCTC ACGGCTGTCC ACCATCGCTG TGGCGACGCT CGCCTGCACG
GCGGGAGGTA TGTCTGCGGC TGTGCCGTCG CATGCTGATA CGACGGTGTC TGCGGGGTTG
TCCGTTCCGA GTGAGGTGAG CATCAGTTCT GCGACCGTCA CCGCGGACAT ATCCGGCTCC
GAGGCGCCGG CTGGTGCGAC CTACACTATC GACTGGGGCG ACGGCGTTCA GAGTGTCACC
AGCGACAAGG ACACCCCCCT GACCCACACC TATACGCGAG TCGGTGGATT CGGCGTCACC
TTGAAGGTGA CCTCCTCGGA CGACAACGAT CAGCAACGCG TCCCGGTGAC CGTCGACCCC
GTCGGCGGGG CGGTGGCCGC TTCGGCCACC AGCCTGGTCG ACCGGTCGCC GATCACTGTC
ACCATCACGC CGCCCAGCCG GCTCGGGACC GGCGAGAGCG TCACCGGCTA CTCCGTTGAT
CTCGATTGCG GCGCTGGTCA GACGTCGACC TACAGCATCA GTGCCGGCTC AGACCTCAGC
GTCACCGAGC CCGTCCACTG CATCGGGAAA GTCCTCGTCA GTGTGCAGGG CACGCTCAAC
GACGGCGGAC ATTTCTGGCT CGACGGACCC ACGCTGACCG TCACTGCGGC CCAGCCGGTG
TTGCACGCGA GCGTGACGGT CACCGCGCCG CACACCGTGC AGGTAGACCT GGCCGGCTGC
AGCGTCGATT TCGCCCCCTC CAGCTACCCG ATGTTCTCCA TCGACTGGGG CGACGGCACT
TCCCTCAAGA ACGACGACCT CGCCTCCGCG AGCTTGCACC AGTCCATGCC GACCCACTGG
TACACCACCG CCGGCACCAA GACCGTCACC ATCTGGATCG GCGACGGCGT GGGGCCCTCC
GCGACCACGA CCCGTACCAT CACGCTCACC GACCCGGCGG TGACCGCCAC CGTCCAGCCT
GTGGCGGGCG CCGACCGCTA CGCGACCGGC GTCCTGGCCT CCCAGCGCGC CTTCCCCGCC
GCAGGATCGG CCGGCGCCGT GGTCCTTGCC CGGGGCGACC AGTTCGCCGA CGCGCTCACC
GGGATACCGC TGGCCTCTTA TCGCCACGCC TCGCTGCTGG TCACCCCTGG CGGTCCCGGC
GCGACGCTGG ACCCTCGCGT GGCCGCCGAG ATCCAGCGCG TGCTGGGACC GGGCACGGGT
AAGACCGTCT ACCTCCTCGG CGGAACGGCC GCACTGCCGC AAGGTATCGC CGACTACATC
ACCAAGACCT TGCACTACCG CGTGGTCCGC TACGCCGGCA CCGACCGGTA TGCCACAGCC
CTGATCATCG CCAAGACCGG GCTCGACAAC CCCGGCCGCA TCGTCGCAGC CCGCGGCGAC
GACTTCGCCG ACGCTCTGAC GGCAGGACCC CTGGCCGCCG ACAAACTCAC CGACGCCAGC
GGCAAGCCCG CCGCGATCGT CCTGACCCAG GGCCCGGCCG AGAAAGCGAC GGTCGATCCC
GCAACCGCCG CTTACATCCG CAGCAAGGAG AGGACAGCCG GCGCCGTCAC CGCGGTCGGC
GGCGGCGCCT GGACAGCTCT CCAACAGCCC GCGATGTACG TCGCCGGAGC CGTCACCGGC
ATCGTCGGCG GCGACCGCTA CGGAACCGCG ACCGCCGTCG CCAACGCCTG GGGCACCAAC
ACGCAGAACA AGTACACCAT CGGCCTGGCG ACCGGTACCG GCTTCGCCGA CGCCCTGACC
GGTGGCGCGC TGACCGCACA CGCCAACGGT CCTCTGCTCC TCACCGACCC GGCCGTGCTC
AGCCCGGCAA CAGCCAACTA CCTCCGCGCC TACGGCACTT CGATCGCCAC GATCGACGTC
TTCGGCGGTC CCACTGCCAT CGCCCCGACC GTCATCAATG CCGTCTACCA GCAGCTCTCC
ATGCCGTACT GA
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| Protein sequence | MPSPSRSRLS TIAVATLACT AGGMSAAVPS HADTTVSAGL SVPSEVSISS ATVTADISGS
EAPAGATYTI DWGDGVQSVT SDKDTPLTHT YTRVGGFGVT LKVTSSDDND QQRVPVTVDP
VGGAVAASAT SLVDRSPITV TITPPSRLGT GESVTGYSVD LDCGAGQTST YSISAGSDLS
VTEPVHCIGK VLVSVQGTLN DGGHFWLDGP TLTVTAAQPV LHASVTVTAP HTVQVDLAGC
SVDFAPSSYP MFSIDWGDGT SLKNDDLASA SLHQSMPTHW YTTAGTKTVT IWIGDGVGPS
ATTTRTITLT DPAVTATVQP VAGADRYATG VLASQRAFPA AGSAGAVVLA RGDQFADALT
GIPLASYRHA SLLVTPGGPG ATLDPRVAAE IQRVLGPGTG KTVYLLGGTA ALPQGIADYI
TKTLHYRVVR YAGTDRYATA LIIAKTGLDN PGRIVAARGD DFADALTAGP LAADKLTDAS
GKPAAIVLTQ GPAEKATVDP ATAAYIRSKE RTAGAVTAVG GGAWTALQQP AMYVAGAVTG
IVGGDRYGTA TAVANAWGTN TQNKYTIGLA TGTGFADALT GGALTAHANG PLLLTDPAVL
SPATANYLRA YGTSIATIDV FGGPTAIAPT VINAVYQQLS MPY
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